RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RNF10Q8N5U6 811 aaKnown RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 RSPH1Q8WYR4 309 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 GHSRQ92847 366 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 TMEM230Q96A57 120 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 IFT74Q96LB3 600 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 PANX2Q96RD6 677 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 MICU1Q9BPX6 476 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 TMEM9BQ9NQ34 198 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 SLC7A11Q9UPY5 501 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 APCP25054 2843 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGKV1-27A0A075B6S5 117 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 SMIM26A0A096LP01 95 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 GOSR2O14653 212 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 CDH16O75309 829 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 PTBP3O95758 552 aaKnown RBP-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 RGS4P49798 205 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 YBEYP58557 167 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 PLP1P60201 277 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 YWHAGP61981 247 aaKnown RBP eCLIP-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 PLCXD2Q0VAA5 305 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 GPR107Q5VW38 600 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 TTC23Q5W5X9 447 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 NPSR1Q6W5P4 371 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 RTL4Q6ZR62 310 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 TCF23Q7RTU1 214 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 TMEM150AQ86TG1 271 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 SELENOHQ8IZQ5 122 aaKnown RBP-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 KCNG3Q8TAE7 436 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 RAB3IL1Q8TBN0 382 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 THRSPQ92748 146 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 PLEKHA8Q96JA3 519 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 PKNOX2Q96KN3 472 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 OR4K3Q96R72 315 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 SLC19A3Q9BZV2 496 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 HSD3B7Q9H2F3 369 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 ANKRD19PQ9H560 264 aa-0.57□□□□□ -2.5
RNU6-238P-201ENST00000363313 KIF16BQ96L93 1317 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGHV3OR16-9A0A0B4J2B5 98 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGKV1-6A0A0C4DH72 117 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 GLYATL1P3A0A0U1RQE8 302 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 PLPP1O14494 284 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 GGT1P19440 569 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 U2AF2P26368 475 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 RPS15AP62244 130 aaKnown RBP-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 MRPS22P82650 360 aaKnown RBP-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 CBX1P83916 185 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 IFITM3Q01628 133 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 LIPEQ05469 1076 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 CASP8Q14790 479 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 LRRC8AQ8IWT6 810 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 TCAIMQ8N3R3 496 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 OR2V1Q8NHB1 315 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 RBPMSQ93062 196 aaKnown RBP-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 KCNS1Q96KK3 526 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 COPS8Q99627 209 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 KCNS3Q9BQ31 491 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 DDX18Q9NVP1 670 aaKnown RBP-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 NUP50Q9UKX7 468 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 CES1P1Q9UKY3 287 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 RAB22AQ9UL26 194 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 TENM4Q6N022 2769 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 CNTNAP1P78357 1384 aa-0.58□□□□□ -2.5
RNU6-238P-201ENST00000363313 ARPC3O15145 178 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 IL9P15248 144 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 BLVRBP30043 206 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 PSG4Q00888 419 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 ZNF829Q3KNS6 432 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 ACSBG2Q5FVE4 666 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 MFSD14CQ5VZR4 134 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 ANKRD26P1Q6NSI1 321 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 OPN5Q6U736 354 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 MUC15Q8N387 334 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 DRAM1Q8N682 238 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 HAUS1Q96CS2 278 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 SENP8Q96LD8 212 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 OR8B2Q96RD0 313 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 PSORS1C2Q9UIG4 136 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 ICOSQ9Y6W8 199 aa-0.59□□□□□ -2.5
RNU6-238P-201ENST00000363313 METTL21EPA6NDL7 271 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 PLPP3O14495 311 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 ETHE1O95571 254 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 RPA2P15927 270 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 IFNA8P32881 189 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 GMFBP60983 142 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 KRTAP6-1Q3LI64 71 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 C1orf185Q5T7R7 199 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 TMPRSS11AQ6ZMR5 421 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 PSTKQ8IV42 348 aaKnown RBP-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 APOBEC3DQ96AK3 386 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 C10orf35Q96D05 121 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 Q96MT0 163 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 B9D2Q9BPU9 175 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 RAB18Q9NP72 206 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 TERF2IPQ9NYB0 399 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 NINJ2Q9NZG7 142 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 PIGLQ9Y2B2 252 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 PEX16Q9Y5Y5 336 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 U3KQK5 164 aa-0.6□□□□□ -2.51
RNU6-238P-201ENST00000363313 AKNAQ7Z591 1439 aa-0.61□□□□□ -2.51
RNU6-238P-201ENST00000363313 KLHL41O60662 606 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms