RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 SEMG1P04279 462 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ZNF880Q6PDB4 577 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TMEM156Q8N614 296 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 DDIT4LQ96D03 193 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 UBL7Q96S82 380 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 YIPF1Q9Y548 306 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LOC107986453A0A1B0GWG9 222 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TCRBV21S2A2A0A5A6 115 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SLC17A2O00624 439 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 CST7O76096 145 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GJA4P35212 333 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GPX4P36969 197 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 BSXQ3C1V8 233 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LINC00346Q8IVM7 164 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PAAF1Q9BRP4 392 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ALKBH7Q9BT30 221 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SLC17A5Q9NRA2 495 aa10.68□□□□□ -0.7
CDK5RAP2-201ENST00000349780 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ZNF43P17038 809 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 HOXA5P20719 270 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 NKAIN1Q4KMZ8 207 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SLC39A5Q6ZMH5 540 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RTN4RL1Q86UN2 441 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 OLFM2O95897 454 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ACRP10323 421 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RCC1P18754 421 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PSMB5P28074 263 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SLC6A8P48029 635 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ANAPC16Q96DE5 110 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 FAM173AQ9BQD7 235 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SNRPCP09234 159 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ADH5P11766 374 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PRPH2P23942 346 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GRB2P62993 217 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GPM6BQ13491 265 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 OR6C3Q9NZP0 311 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 BMPR1BO00238 502 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LCATP04180 440 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 CD14P08571 375 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 MTCP1P56278 107 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 KHDC3LQ587J8 217 aa10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 C19orf47Q8N9M1 422 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ONECUT2O95948 504 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 BMP5P22003 454 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 HOXA11P31270 313 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 UBE2G2P60604 165 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 KCNAB1Q14722 419 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TMEM91Q6ZNR0 172 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 NKX3-1Q99801 234 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SLC46A2Q9BY10 475 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LANCL2Q9NS86 450 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ZNF737O75373 536 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 WDR73Q6P4I2 378 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ZNF740Q8NDX6 193 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GTF3AQ92664 365 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GMLQ99445 158 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PRSS50Q9UI38 385 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GAGE10A6NGK3 116 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 MARCH11A6NNE9 402 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 LBX1P52954 281 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PLP1P60201 277 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 HIST3H3Q16695 136 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 JMJD6Q6NYC1 403 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 MMABQ96EY8 250 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 A0A1W2PRU2 124 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 DDAH2O95865 285 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 HIST1H1BP16401 226 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RELQ04864 619 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ELOBQ15370 118 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 C5P01031 1676 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 GLRA1P23415 457 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 CDC34P49427 236 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 ERVFC1-1P60608 527 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 SPANXN5Q5MJ07 72 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 FAHD2BQ6P2I3 314 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 PHOSPHO2Q8TCD6 241 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 FAHD2AQ96GK7 314 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 HDAC8Q9BY41 377 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 OR1A1Q9P1Q5 309 aa10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-201ENST00000349780 TUSC2O75896 110 aa10.65□□□□□ -0.7
CDK5RAP2-201ENST00000349780 CPMP14384 443 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms