RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 NFYAP23511 347 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 GDNFP39905 211 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 NHLH1Q02575 133 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 TMEM179BQ7Z7N9 219 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 Q8IYB0 196 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 PARP16Q8N5Y8 322 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 ZNF441Q8N8Z8 693 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 OR13G1Q8NGZ3 307 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 RAB1BQ9H0U4 201 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 AKIRIN1Q9H9L7 192 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 THADAQ6YHU6 1953 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 SIRPB1O00241 398 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 HLA-AP01891 365 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 S100A9P06702 114 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 CDCP2Q5VXM1 449 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 HAGHLQ6PII5 290 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 IDO2Q6ZQW0 420 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 COMTD1Q86VU5 262 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 TUSC5Q8IXB3 177 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 PSD2Q9BQI7 771 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 RIMS4Q9H426 269 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 PTPRFP10586 1907 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 TMEM82A0PJX8 343 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 A8MV72 311 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 PMS2P2O95744 297 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 S100A1P23297 94 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 NOXA1Q86UR1 476 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 SPACA3Q8IXA5 215 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 TMEM251Q8N6I4 163 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 OR2G2Q8NGZ5 317 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 CCL17Q92583 94 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 FBXL2Q9UKC9 423 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 FBXO7Q9Y3I1 522 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 NCOR2Q9Y618 2525 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 LRRC10Q5BKY1 277 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 PHC2Q8IXK0 858 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 PPP1R14DQ9NXH3 145 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 CCL27Q9Y4X3 112 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 MEIKINA0A087WXM9 373 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 TFP02787 698 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 HOXA1P49639 335 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 CD226Q15762 336 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 DEGS2Q6QHC5 323 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 OR10X1Q8NGY0 326 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 PLEKHF2Q9H8W4 249 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 MYOZ1Q9NP98 299 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 SLC22A13Q9Y226 551 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 ANKRD34BA5PLL1 514 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 LIPT2A6NK58 231 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 CTSBP07858 339 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 ATF1P18846 271 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 C12orf73Q69YU5 71 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 HYLS1Q96M11 299 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 OR51J1Q9H342 316 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 SCPEP1Q9HB40 452 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 CES1P1Q9UKY3 287 aa14.64□□□□□ -0.07
SMARCA4-201ENST00000344626 NDUFB3O43676 98 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 EFEMP2O95967 443 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 CT45A8P0DMV1 189 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 CT45A9P0DMV2 189 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 LIPAP38571 399 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 CT45A2Q5DJT8 189 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 SLC36A1Q7Z2H8 476 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 LSMEM1Q8N8F7 131 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 ADAT1Q9BUB4 502 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 CHRNA10Q9GZZ6 450 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 C20orf141Q9NUB4 165 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 ING1Q9UK53 422 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 GABARAPO95166 117 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 HFEQ30201 348 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 PABPC1L2AQ5JQF8 200 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 STEAP1BQ6NZ63 245 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 OR2Z1Q8NG97 314 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 PIK3IP1Q96FE7 263 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 TSPAN32Q96QS1 320 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 NDUFB11Q9NX14 153 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 ZSWIM8A7E2V4 1837 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 IGKV1-8A0A0C4DH67 115 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 KLF3P57682 345 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 ATG4DQ86TL0 474 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 S100PBPQ96BU1 408 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 GMPPAQ96IJ6 420 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 M0R036 132 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 TMEM127O75204 238 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 IFNA4P05014 189 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 ZNF32P17041 273 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 CAMLGP49069 296 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 DLX5P56178 289 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 GNG3P63215 75 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 PLA2G12AQ9BZM1 189 aa14.63□□□□□ -0.07
SMARCA4-201ENST00000344626 LGALS8O00214 317 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 NGFRP08138 427 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 CSF3P09919 207 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 CD300LDQ6UXZ3 194 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 SLC25A26Q70HW3 274 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 HAO2Q9NYQ3 351 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 LRP12Q9Y561 859 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 PTBP1P26599 531 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 HMGA2P52926 109 aa14.62□□□□□ -0.07
SMARCA4-201ENST00000344626 CDK5Q00535 292 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms