RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CATSPERDQ86XM0 798 aa13.25□□□□□ -0.29
CLCN1-201ENST00000343257 C12orf76Q8N812 135 aaPredicted RBP13.25□□□□□ -0.29
CLCN1-201ENST00000343257 HSD17B11Q8NBQ5 300 aa13.25□□□□□ -0.29
CLCN1-201ENST00000343257 VSTM2LQ96N03 204 aa13.25□□□□□ -0.29
CLCN1-201ENST00000343257 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
CLCN1-201ENST00000343257 OR52A1Q9UKL2 312 aa13.25□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF205O95201 554 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 IGFBP3P17936 291 aaPredicted RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 INSM1Q01101 510 aaPredicted RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 FMODQ06828 376 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 GAMTQ14353 236 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF141Q15928 474 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 C14orf28Q4W4Y0 310 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 MED25Q71SY5 747 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SGK3Q96BR1 496 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 C2orf50Q96LR7 162 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 DOK5Q9P104 306 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 TXNDC12O95881 172 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 IGFALSP35858 605 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SURF2Q15527 256 aaPredicted RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 MR1Q95460 341 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 RARRES2Q99969 163 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 GPR61Q9BZJ8 451 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 POLE3Q9NRF9 147 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 FAM86C1Q9NVL1 165 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 A0A0A6YYH2 397 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 A6NJ64 397 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 RAMP1O60894 148 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SERPINA2P20848 420 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF84P51523 738 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SEC13P55735 322 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 RSU1Q15404 277 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 CST6Q15828 149 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF124Q15973 351 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF239Q16600 458 aaKnown RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 C4orf17Q53FE4 359 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 KCTD18Q6PI47 426 aaPredicted RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 HDAC8Q9BY41 377 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 SMOC1Q9H4F8 434 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 PARP11Q9NR21 331 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
CLCN1-201ENST00000343257 GPR132Q9UNW8 380 aa13.24□□□□□ -0.29
CLCN1-201ENST00000343257 XRCC2O43543 280 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF217O75362 1048 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 SLC35E2P0CK97 266 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 CXCR1P25024 350 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 SNCAP37840 140 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 OR3A2P47893 321 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 PPM1FP49593 454 aaPredicted RBP13.23□□□□□ -0.29
CLCN1-201ENST00000343257 SSTP61278 116 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 OR5D18Q8NGL1 313 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 MFSD8Q8NHS3 518 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 ADAT3Q96EY9 351 aaPredicted RBP13.23□□□□□ -0.29
CLCN1-201ENST00000343257 CDC6Q99741 560 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 LYRM4Q9HD34 91 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 ARHGEF17Q96PE2 2063 aaPredicted RBP13.23□□□□□ -0.29
CLCN1-201ENST00000343257 SLC2A1P11166 492 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF708P17019 499 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 AMY2BP19961 511 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 TAS2R31P59538 309 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
CLCN1-201ENST00000343257 OR56B1Q8NGI3 324 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 SOX7Q9BT81 388 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 APOOQ9BUR5 198 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 RTN4RQ9BZR6 473 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 KIR3DX1Q9H7L2 352 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 GFOD1Q9NXC2 390 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
CLCN1-201ENST00000343257 RAD51DO75771 328 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 CST4P01036 141 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 PPP1CCP36873 323 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RPS23P62266 143 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RAP1AP62834 184 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 EIF5AP63241 154 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 FAHD2BQ6P2I3 314 aaPredicted RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 POC1AQ8NBT0 407 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR1E3Q8WZA6 343 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 FAHD2AQ96GK7 314 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RTBDNQ9BSG5 229 aaPredicted RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 G6PC3Q9BUM1 346 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 CNTNAP3Q9BZ76 1288 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RAB18Q9NP72 206 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 PRSS37A4D1T9 235 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 C2orf74A8MZ97 194 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 HCRTR2O43614 444 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 FOXS1O43638 330 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 HLA-DOBP13765 273 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 HOXA5P20719 270 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 BCKDHBP21953 392 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms