RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CADP27708 2225 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 A0A1B0GVI7 797 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 IFITM5A6NNB3 132 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 G3V3Q6 166 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 WRBO00258 174 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 WNT11O96014 354 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 QDPRP09417 244 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 RAG2P55895 527 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 CLDN15P56746 228 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 BAIAP2L2Q6UXY1 529 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 SGCZQ96LD1 299 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 PFDN5Q99471 154 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 EMC9Q9Y3B6 208 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 MPTX1A8MV57 137 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 CBR3O75828 277 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 ZFPL1O95159 310 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 MT-ATP6P00846 226 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 IGHEP01854 428 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 SMIM6P0DI80 62 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 CYB5R2Q6BCY4 276 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 FAM122BQ7Z309 247 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 SULF2Q8IWU5 870 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 OR51A4Q8NGJ6 313 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 FER1L6-AS2Q96M78 137 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 ARPC3O15145 178 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 C4BPBP20851 252 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 TMPPEQ6ZT21 453 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
COL18A1-201ENST00000342220 OR5M9Q8NGP3 310 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 PSMF1Q92530 271 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 OR51M1Q9H341 326 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
COL18A1-201ENST00000342220 ARPC1BO15143 372 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 TXNL1O43396 289 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 KHDRBS3O75525 346 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 PSMB1P20618 241 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF281Q9Y2X9 895 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 MSX1P28360 303 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 DSCR4P56555 118 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 ALKBH1Q13686 389 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 FDCSPQ8NFU4 85 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 OR2AJ1Q8NGZ0 328 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 SYNPRQ8TBG9 265 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 PAQR8Q8TEZ7 354 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 CA5BP1Q8WTZ4 195 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 ADAT1Q9BUB4 502 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 ACACBO00763 2458 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 CACNA1AO00555 2505 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 A0A096LPE4 126 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 A0A1W2PPZ6 126 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 GPRIN2O60269 458 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 ZIC3O60481 467 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 IFI6P09912 130 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 H2BFMP0C1H6 154 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 RAD52P43351 418 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 DAP3P51398 398 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 RPS4XP62701 263 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 PPIAP62937 165 aaKnown RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 AKIRIN2Q53H80 203 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 HSD17B13Q7Z5P4 300 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 MCEMP1Q8IX19 187 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 DMRTC2Q8IXT2 367 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-201ENST00000342220 DMRTA2Q96SC8 542 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 V9GY05 133 aa11.58□□□□□ -0.56
COL18A1-201ENST00000342220 GABARAPH6UMI1 98 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 GPR31O00270 319 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 RER1O15258 196 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 CXCL2P19875 107 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 PTH2RP49190 550 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 SLC43A2Q8N370 569 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 OR10D3Q8NH80 312 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 MFSD8Q8NHS3 518 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 SPACA5Q96QH8 159 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 NMNAT2Q9BZQ4 307 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 OR5V1Q9UGF6 321 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 BOKQ9UMX3 212 aaPredicted RBP11.57□□□□□ -0.56
COL18A1-201ENST00000342220 SLC5A6Q9Y289 635 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 PKDREJQ9NTG1 2253 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 IGHG1P01857 330 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
COL18A1-201ENST00000342220 HSD11B1P28845 292 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 PTGFRP43088 359 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 CSNK1A1P48729 337 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 SNTB1Q13884 538 aaKnown RBP11.57□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM69Q5SWH9 247 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 LINC01590Q5TEZ4 76 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 STK35Q8TDR2 534 aa11.57□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF837Q96EG3 531 aaPredicted RBP11.57□□□□□ -0.56
COL18A1-201ENST00000342220 FAM71F1Q96KD3 344 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms