RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LAX1Q8IWV1 398 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 DNAAF1Q8NEP3 725 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 C1orf162Q8NEQ5 155 aaPredicted RBP15.08■□□□□ 0.01
CLDN4-201ENST00000340958 OR1J2Q8NGS2 313 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 REEP6Q96HR9 211 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 ADAM30Q9UKF2 790 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 C5orf63A6NC05 138 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 FAM25AB3EWG3 89 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 FAM25CB3EWG5 89 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 FAM25GB3EWG6 89 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 E9PLN8 166 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 J3QKU1 62 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 HOXB1P14653 301 aaPredicted RBP15.08■□□□□ 0
CLDN4-201ENST00000340958 COX5AP20674 150 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 HGFACQ04756 655 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 KRTAP27-1Q3LI81 207 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 BHLHA15Q7RTS1 189 aaPredicted RBP15.08■□□□□ 0
CLDN4-201ENST00000340958 OR2AE1Q8NHA4 323 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 SGK3Q96BR1 496 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 SOX7Q9BT81 388 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 PALMDQ9NP74 551 aa15.08■□□□□ 0
CLDN4-201ENST00000340958 LOC100509620A0A075B734 347 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 A0A0G2JK05 382 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 IFITM5A6NNB3 132 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 DHRS3O75911 302 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 FSTP19883 344 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 ANOS1P23352 680 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 TNFSF8P32971 234 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 SPOCK1Q08629 439 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 MRPL49Q13405 166 aaKnown RBP15.07■□□□□ 0
CLDN4-201ENST00000340958 GLT8D1Q68CQ7 371 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 C16orf87Q6PH81 154 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 SLC30A7Q8NEW0 376 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 DIRAS2Q96HU8 199 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 SLC30A2Q9BRI3 323 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 AKIP1Q9NQ31 210 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 B3GNT2Q9NY97 397 aa15.07■□□□□ 0
CLDN4-201ENST00000340958 A0A0G2JNJ9 132 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 MEGF11A6BM72 1044 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 AIPO00170 330 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 HPGDSO60760 199 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 SERPINA5P05154 406 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ATF1P18846 271 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 RAB3AP20336 220 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 CCL1P22362 96 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 MALLQ13021 153 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 TBC1D28Q2M2D7 210 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 PGAP1Q75T13 922 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 PARP16Q8N5Y8 322 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 PLPP7Q8NBV4 271 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 CCDC54Q8NEL0 328 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 TRMT10AQ8TBZ6 339 aaKnown RBP15.06■□□□□ 0
CLDN4-201ENST00000340958 AKAP1Q92667 903 aaKnown RBP eCLIP15.06■□□□□ 06e-10■■■■■ 113.9
CLDN4-201ENST00000340958 ITFG2Q969R8 447 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ADAT3Q96EY9 351 aaPredicted RBP15.06■□□□□ 0
CLDN4-201ENST00000340958 MS4A3Q96HJ5 214 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 LYZL4Q96KX0 146 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 PIGMQ9H3S5 423 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 RGCCQ9H4X1 137 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ABRACLQ9P1F3 81 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 Q9UFV3 132 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 PIGLQ9Y2B2 252 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 FLNCQ14315 2725 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 J3QRK9 145 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 XRCC2O43543 280 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ADRA2CP18825 462 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 IDH3GP51553 393 aaPredicted RBP15.06■□□□□ 0
CLDN4-201ENST00000340958 ZNF45Q02386 682 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 GLYATL3Q5SZD4 288 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 TMEM211Q6ICI0 200 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 C17orf78Q8N4C9 275 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 JAGN1Q8N5M9 183 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 SAMD12Q8N8I0 201 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ST6GALNAC3Q8NDV1 305 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 SEMA6DQ8NFY4 1073 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 OR13C9Q8NGT0 318 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 OR14K1Q8NGZ2 314 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 POM121L2Q96KW2 1035 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 GFI1Q99684 422 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 C1QTNF6Q9BXI9 259 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 C1QTNF5Q9BXJ0 243 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ZCCHC4Q9H5U6 513 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 ZNF391Q9UJN7 358 aa15.06■□□□□ 0
CLDN4-201ENST00000340958 MSTNO14793 375 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 PAHP00439 452 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 ERCC1P07992 297 aaPredicted RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 SNRPBP14678 240 aaKnown RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 IGFBP3P17936 291 aaPredicted RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 BDKRB2P30411 391 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 ALKBH2Q6NS38 261 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 ZNF474Q6S9Z5 364 aaPredicted RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 ZNF584Q8IVC4 421 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 OR1M1Q8NGA1 313 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 RND1Q92730 232 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 APOBEC3DQ96AK3 386 aaPredicted RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 COX4I2Q96KJ9 171 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 LIN7BQ9HAP6 207 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 CDH20Q9HBT6 801 aa15.05■□□□□ -0
CLDN4-201ENST00000340958 EIF3KQ9UBQ5 218 aaKnown RBP15.05■□□□□ -0
CLDN4-201ENST00000340958 ZNF629Q9UEG4 869 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms