RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 HCKP08631 526 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 HOXB2P14652 356 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 IGFBP3P17936 291 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 ZNF93P35789 620 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 C5orf46Q6UWT4 87 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 SLC25A43Q8WUT9 341 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 WIF1Q9Y5W5 379 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 C5orf52A6NGY3 159 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 CLN5O75503 358 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 YIF1AO95070 293 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 TXNDC12O95881 172 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 DHPSP49366 369 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 IAH1Q2TAA2 248 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 EMC4Q5J8M3 183 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 SHISA6Q6ZSJ9 500 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 Q6ZSR6 202 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 WDFY1Q8IWB7 410 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 EDARADDQ8WWZ3 215 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 MAP3K3Q99759 626 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
CHRNA3-201ENST00000326828 IGLV1-36A0A0B4J1U3 117 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 SMIM6P0DI80 62 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 OR3A4PP47883 348 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 HHEXQ03014 270 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 SRSF4Q08170 494 aaKnown RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 MIDNQ504T8 468 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 PRSS54Q6PEW0 395 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 OR5H2Q8NGV7 314 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 ARHGAP5-AS1Q96IT6 56 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 MYOZ1Q9NP98 299 aaPredicted RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 PUS1Q9Y606 427 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 A0A0A6YYH2 397 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 A6NJ64 397 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 H3BML4 177 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 GP1BBP13224 206 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 ZNF20P17024 532 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 CX3CR1P49238 355 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 RSPO4Q2I0M5 234 aaPredicted RBP12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 FBXL17Q9UF56 701 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 MMP24Q9Y5R2 645 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 URGCP-MRPS24S4R325 110 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.37
CHRNA3-201ENST00000326828 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 LDLRAD4O15165 306 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 RAD51DO75771 328 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 BGLAPP02818 100 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 PLAC9Q5JTB6 97 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 ZNF704Q6ZNC4 412 aaPredicted RBP12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 SKA3Q8IX90 412 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 C5orf34Q96MH7 638 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 PFDN5Q99471 154 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 NMES1Q9C002 83 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 SLC2A8Q9NY64 477 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 VDAC3Q9Y277 283 aa12.71□□□□□ -0.38
CHRNA3-201ENST00000326828 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 ZNF878C9JN71 531 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 PRAMEF26H0Y7S4 382 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 K7EPK0 472 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 XRCC2O43543 280 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 KLF8O95600 359 aaPredicted RBP12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 CSTBP04080 98 aaKnown RBP12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 FCGR2CP31995 323 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 SP6Q3SY56 376 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 NUP210LQ5VU65 1888 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 CARD17Q5XLA6 110 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 OR13H1Q8NG92 308 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 THRSPQ92748 146 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 SLC5A7Q9GZV3 580 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 CACFD1Q9UGQ2 172 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 RCL1Q9Y2P8 373 aaKnown RBP12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 SUPT4H1P63272 117 aaKnown RBP12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 CDPF1Q6NVV7 123 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 KLHL24Q6TFL4 600 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 ST7LQ8TDW4 575 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 BSCL2Q96G97 398 aaPredicted RBP12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 TOX2Q96NM4 488 aa12.7□□□□□ -0.38
CHRNA3-201ENST00000326828 CDC6Q99741 560 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms