RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GPN3Q9UHW5 284 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-201ENST00000320755 KANTRA0A1W2PQU2 76 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 C9orf170A2RU37 121 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 F5H5K5 113 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 MASP2O00187 686 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 SSX5O60225 188 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 ZBTB25P24278 435 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 CX3CR1P49238 355 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 NAXDQ8IW45 347 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 LRRC18Q8N456 261 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 PTX4Q96A99 478 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 LIN37Q96GY3 246 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-201ENST00000320755 URB1O60287 2271 aaKnown RBP15.4■□□□□ 0.06
COL9A1-201ENST00000320755 DLSTP36957 453 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 NPY4RP50391 375 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 SLC25A42Q86VD7 318 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 PPP1R3BQ86XI6 285 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 WDSUB1Q8N9V3 476 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 ZBTB44Q8NCP5 570 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 OR2M3Q8NG83 312 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 MAFIPQ8WZ33 124 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 A0A0A6YYD4 124 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 SNAPC5O75971 98 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 ZP3P21754 424 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 GPR85P60893 370 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 BAMBIQ13145 260 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 C11orf87Q6NUJ2 197 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 OR10K1Q8NGX5 313 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 SLC22A8Q8TCC7 542 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 RAB3CQ96E17 227 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 GNRHR2Q96P88 292 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 PHB2Q99623 299 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 CELSR3Q9NYQ7 3312 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 COL6A3P12111 3177 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 E9PLN8 166 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 MSX1P28360 303 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 AGTR1P30556 359 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 PLAC9Q5JTB6 97 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 UNQ6126/PRO20091Q6UXV3 157 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 SPACA9Q96E40 222 aaPredicted RBP15.4■□□□□ 0.06
COL9A1-201ENST00000320755 UQCC2Q9BRT2 126 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 LPAR5Q9H1C0 372 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 PPA2Q9H2U2 334 aa15.4■□□□□ 0.06
COL9A1-201ENST00000320755 ELL3Q9HB65 397 aaPredicted RBP15.4■□□□□ 0.06
COL9A1-201ENST00000320755 EXPH5Q8NEV8 1989 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 A0A1W2PNV4 684 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 WDPCPO95876 746 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 APOC3P02656 99 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 P2RY4P51582 365 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 ARFRP1Q13795 201 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 OR5AS1Q8N127 324 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 ST6GALNAC5Q9BVH7 336 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 FN3KRPQ9HA64 309 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 NPIPB13A6NJU9 1138 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 NPIPB4C9JG80 1138 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 HOXD4P09016 255 aaPredicted RBP15.39■□□□□ 0.05
COL9A1-201ENST00000320755 PRKACBP22694 351 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 FGL1Q08830 312 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF416Q9BWM5 594 aa15.39■□□□□ 0.05
COL9A1-201ENST00000320755 ARPC4-TTLL3A0A0A6YYG9 625 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 HTR3BO95264 441 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 MGMTP16455 207 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 CASRP41180 1078 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 MICBQ29980 383 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 BVESQ8NE79 360 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 NARS2Q96I59 477 aaKnown RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 ARHGAP5-AS1Q96IT6 56 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 TMEM59Q9BXS4 323 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 MBD2Q9UBB5 411 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 MUC3AQ02505 3323 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 F5H0A9 414 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 SDCBPO00560 298 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 EFSO43281 561 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 TPD52L2O43399 206 aaKnown RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 GUCA1AP43080 201 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 SLC9A3R2Q15599 337 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 JMJD6Q6NYC1 403 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-201ENST00000320755 PXT1Q8NFP0 134 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 THAP6Q8TBB0 222 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 PGAM5Q96HS1 289 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 SHDQ96IW2 340 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 OXGR1Q96P68 337 aa15.38■□□□□ 0.05
COL9A1-201ENST00000320755 A0A0D9SG52 128 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 TMEM14DPA8MWL7 114 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 D6RAR5 112 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 RAD51DO75771 328 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 CD8AP01732 235 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF17P17021 662 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 SLC25A47Q6Q0C1 308 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 ROBO4Q8WZ75 1007 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 CHRDQ9H2X0 955 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 TNFSF18Q9UNG2 199 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 CDC14BO60729 498 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 CALCRP30988 508 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 PRSS12P56730 875 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 STARD6P59095 220 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 C1QL2Q7Z5L3 287 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 MITD1Q8WV92 249 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 RBM24Q9BX46 236 aaKnown RBP15.37■□□□□ 0.05
COL9A1-201ENST00000320755 TAS2R3Q9NYW6 316 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 651.8 ms