RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 AKAIN1P0CW23 69 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 VSIG8P0DPA2 414 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 GFRA1P56159 465 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ACTBP60709 375 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ACTG1P63261 375 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 UNC119Q13432 240 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 RBMS2Q15434 407 aaKnown RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 RSPO1Q2MKA7 263 aaPredicted RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 FAM27BQ5VT28 67 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 METTL11BQ5VVY1 283 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 STEAP1BQ6NZ63 245 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ZNF529Q6P280 563 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 DOK3Q7L591 496 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ZNF101Q8IZC7 436 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 CHST4Q8NCG5 386 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 OR2M7Q8NG81 312 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ZFAND1Q8TCF1 268 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ADGRG7Q96K78 797 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 HYLS1Q96M11 299 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 UQCC2Q9BRT2 126 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 GINS4Q9BRT9 223 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 RAB22AQ9UL26 194 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ING4Q9UNL4 249 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 COL27A1Q8IZC6 1860 aaPredicted RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 PCNX2A6NKB5 2137 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 MUC6Q6W4X9 2439 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 M0R135 149 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 PRAF2O60831 178 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 TGM6O95932 706 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 RLN1P04808 185 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 PATE4P0C8F1 98 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 CTSSP25774 331 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 CAPZA1P52907 286 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 MRPS34P82930 218 aaKnown RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 TNK1Q13470 666 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 OR1C1Q15619 314 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 TRIP6Q15654 476 aaKnown RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 CCDC92Q53HC0 331 aaPredicted RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 C1QTNF12Q5T7M4 302 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 JMJD6Q6NYC1 403 aaPredicted RBP6.65□□□□□ -1.34
IFT88-201ENST00000319980 PLXDC2Q6UX71 529 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 PGAP1Q75T13 922 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 SULF2Q8IWU5 870 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 GPR137CQ8N3F9 429 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 PTX4Q96A99 478 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ZNF799Q96GE5 643 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 FAM173AQ9BQD7 235 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ABI3Q9P2A4 366 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 ZNF69Q9UC07 566 aa6.65□□□□□ -1.34
IFT88-201ENST00000319980 LOC400499M0QZD8 3231 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 URB1O60287 2271 aaKnown RBP6.65□□□□□ -1.35
IFT88-201ENST00000319980 A0A1B0GUH1 482 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 FAM166BA8MTA8 275 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 CYB5AP00167 134 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 IGHV3-9P01782 118 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 SULT1A3P0DMM9 295 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 SULT1A4P0DMN0 295 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 B4GALT1P15291 398 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 RAB6AP20340 208 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 ZP1P60852 638 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 LAMTOR1Q6IAA8 161 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 TMEM53Q6P2H8 277 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 GLIPR1L1Q6UWM5 242 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 GLDNQ6ZMI3 551 aaPredicted RBP6.65□□□□□ -1.35
IFT88-201ENST00000319980 FOXL2NBQ6ZUU3 175 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 CHMP1BQ7LBR1 199 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 DTX1Q86Y01 620 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 OR5AS1Q8N127 324 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 GABRG1Q8N1C3 465 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 MEIOBQ8N635 442 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 OR14K1Q8NGZ2 314 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 ADAMTS17Q8TE56 1095 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 NPRL2Q8WTW4 380 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 LYZL4Q96KX0 146 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 FAM210AQ96ND0 272 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 GPER1Q99527 375 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 DLL3Q9NYJ7 618 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 LUZP4Q9P127 313 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 MRPS18CQ9Y3D5 142 aaKnown RBP6.65□□□□□ -1.35
IFT88-201ENST00000319980 PCDHGA1Q9Y5H4 931 aa6.65□□□□□ -1.35
IFT88-201ENST00000319980 NCOA6Q14686 2063 aaPredicted RBP6.64□□□□□ -1.35
IFT88-201ENST00000319980 A0A0A6YYH2 397 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 IGKV1-9A0A0C4DH69 117 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 WIPF3A6NGB9 483 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 A6NJ64 397 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 M0QYG6 137 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 TOXO94900 526 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 RAB3DO95716 219 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 CCL1P22362 96 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 MAGEA5P43359 124 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 OR3A4PP47883 348 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 QRFPP83859 136 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 TGIF1Q15583 401 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 CDNFQ49AH0 187 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 ATP1A1-AS1Q5TC04 95 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 RAB12Q6IQ22 244 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 CDH24Q86UP0 819 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 THNSL2Q86YJ6 484 aa6.64□□□□□ -1.35
IFT88-201ENST00000319980 TMEM104Q8NE00 496 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms