RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 LINC01387J3KSC0 135 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 TDGF1P13385 188 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 GALP22466 123 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 RBMXP38159 391 aaKnown RBP13.02□□□□□ -0.33
PTPN9-201ENST00000306726 FHITP49789 147 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 CSRP2Q16527 193 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.33
PTPN9-201ENST00000306726 DYRK2Q92630 601 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 SGK3Q96BR1 496 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 RAB3CQ96E17 227 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.33
PTPN9-201ENST00000306726 HPP00738 406 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 IL5P05113 134 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 FHL5Q5TD97 284 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 C1orf140Q5VVS0 124 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 SLC36A1Q7Z2H8 476 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 APCDD1LQ8NCL9 501 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 NUDT9Q9BW91 350 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 OR5AC2Q9NZP5 309 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 ETV7Q9Y603 341 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 RER1O15258 196 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 LY86O95711 162 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 CD53P19397 219 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 BCKDHBP21953 392 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 RAG2P55895 527 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 ELFN2Q5R3F8 820 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 BAP18Q8IXM2 172 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM217Q8N7C4 229 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 HDHD3Q9BSH5 251 aaPredicted RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 OR51B6Q9H340 312 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 LYRM4Q9HD34 91 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 MMP24Q9Y5R2 645 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 FRYQ5TBA9 3013 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 B3GALNT1O75752 331 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 TSPAN15O95858 294 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 PGCP20142 388 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 OR3A4PP47883 348 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 CAV2P51636 162 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 INSM1Q01101 510 aaPredicted RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 IKZF1Q13422 519 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 NCMAPQ5T1S8 102 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 RNASE11Q8TAA1 199 aaKnown RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 DNASE2BQ8WZ79 361 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 SCARF2Q96GP6 870 aaPredicted RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
PTPN9-201ENST00000306726 MRPL22Q9NWU5 206 aaKnown RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM218A2RU14 115 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 C9orf170A2RU37 121 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 IGHV3-9P01782 118 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 FGF2P09038 288 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 CPN1P15169 458 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 RRADP55042 308 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 OR1D5P58170 312 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 RPL27P61353 136 aaKnown RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ARHGAP5-AS1Q96IT6 56 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 PRRT1Q99946 306 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 PRELID3BQ9Y3B1 194 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 WDFY3Q8IZQ1 3526 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 BCL2L11O43521 198 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 GPR85P60893 370 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ABCA11PQ4W5N1 156 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 C4orf17Q53FE4 359 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 RAB11FIP2Q7L804 512 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 NAA40Q86UY6 237 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ADAT3Q96EY9 351 aaPredicted RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 METTL7AQ9H8H3 244 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 NXT1Q9UKK6 140 aaKnown RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 KCNK7Q9Y2U2 307 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ARPC4-TTLL3A0A0A6YYG9 625 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 A0A1W2PR80 420 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 STMND1H3BQB6 276 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ARPC3O15145 178 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 Q6ZRG5 221 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 PGAM5Q96HS1 289 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 LOXL4Q96JB6 756 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 CDC6Q99741 560 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 LMF2Q9BU23 707 aaKnown RBP13□□□□□ -0.33
PTPN9-201ENST00000306726 RHOFQ9HBH0 211 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 SLC5A6Q9Y289 635 aa13□□□□□ -0.33
PTPN9-201ENST00000306726 PRR33A8MZF0 331 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 YKT6O15498 198 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 FOXS1O43638 330 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR2A4O95047 310 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 WDPCPO95876 746 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 GP1BAP07359 652 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 RPS10P46783 165 aaKnown RBP12.99□□□□□ -0.33
PTPN9-201ENST00000306726 CAMLGP49069 296 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms