RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ASB5Q8WWX0 329 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 PTX4Q96A99 478 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 EMC6Q9BV81 110 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 SLCO5A1Q9H2Y9 848 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 COA3Q9Y2R0 106 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-201ENST00000292476 LRP12Q9Y561 859 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF814B7Z6K7 855 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 CXCL13O43927 109 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 ITGB2P05107 769 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 ITGA5P08648 1049 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 AKAIN1P0CW23 69 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 TMIGD3P0DMS9 266 aaPredicted RBP14.82□□□□□ -0.04
CPSF4-201ENST00000292476 RAD52P43351 418 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 SELENOPP49908 381 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 LHX2P50458 406 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 LY6DQ14210 128 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 HIST3H3Q16695 136 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 PCGF3Q3KNV8 242 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 IGFL3Q6UXB1 125 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 SLC26A10Q8NG04 563 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 OR10H5Q8NGA6 315 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 OR51D1Q8NGF3 324 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 LDAHQ9H6V9 325 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 MGAT4CQ9UBM8 478 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 ING1Q9UK53 422 aaPredicted RBP14.82□□□□□ -0.04
CPSF4-201ENST00000292476 HHLA2Q9UM44 414 aa14.82□□□□□ -0.04
CPSF4-201ENST00000292476 MED13Q9UHV7 2174 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 UBE2QL1A1L167 161 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 H0YC42 278 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SMAD9O15198 467 aaKnown RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 TSC22D2O75157 780 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SYNGR4O95473 234 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 PNPP00491 289 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 GABRA1P14867 456 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF708P17019 499 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 LAP3P28838 519 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 PRSS3P35030 304 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 RFC3P40938 356 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 STARP49675 285 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF81P51508 661 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 CLDN15P56746 228 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 C2orf76Q3KRA6 126 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 CHMP1BQ7LBR1 199 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 NKAIN3Q8N8D7 197 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SLC25A28Q96A46 364 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SRXN1Q9BYN0 137 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 EIF3KQ9UBQ5 218 aaKnown RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 MCTS1Q9ULC4 181 aaKnown RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SLC22A13Q9Y226 551 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 LOC390937A0A1W2PQ73 354 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ATXN7O15265 892 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 RGS11O94810 467 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 FAM87AP0C7U9 286 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 UBCP0CG48 685 aaKnown RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 CSNK1A1P48729 337 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SUCLG1P53597 346 aaKnown RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 P2RX3P56373 397 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 MFGE8Q08431 387 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 CLLU1Q5K131 121 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 TMEM244Q5VVB8 128 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ABLIM2Q6H8Q1 611 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SLC36A1Q7Z2H8 476 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 OR4C16Q8NGL9 310 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 GPX8Q8TED1 209 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 FOXRED1Q96CU9 486 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 UCN2Q96RP3 112 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 SEC22CQ9BRL7 303 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ALX4Q9H161 411 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-201ENST00000292476 EXO5Q9H790 373 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ZDHHC11Q9H8X9 412 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 BEX1Q9HBH7 125 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 GLTPQ9NZD2 209 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 PIPOXQ9P0Z9 390 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF69Q9UC07 566 aa14.81□□□□□ -0.04
CPSF4-201ENST00000292476 TRGV5A0A0B4J1U4 118 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 TMEM272A0A1B0GTI8 110 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 CYTIPO60759 359 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 RAMP1O60894 148 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 WNT11O96014 354 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 HTR2CP28335 458 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 CLDN18P56856 261 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 PSMA6P60900 246 aaKnown RBP14.8□□□□□ -0.04
CPSF4-201ENST00000292476 PLA2G7Q13093 441 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 MPPED2Q15777 294 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 C1orf100Q5SVJ3 147 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 ASPHD2Q6ICH7 369 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 OR7E24Q6IFN5 339 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 SLC25A47Q6Q0C1 308 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 SLC39A7Q92504 469 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 SLC6A15Q9H2J7 730 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 UPB1Q9UBR1 384 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 UBQLN2Q9UHD9 624 aa14.8□□□□□ -0.04
CPSF4-201ENST00000292476 TRAV18A0A075B6X5 111 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 IGHV3-15A0A0B4J1V0 119 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 LEUTXA8MZ59 168 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 LDLRAD4O15165 306 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 LPLP06858 475 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 CELA3AP09093 270 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 PTHLHP12272 177 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 RAB6AP20340 208 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms