RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CEACAM1P13688 526 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 WT1P19544 449 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 TNFSF10P50591 281 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 PCBD1P61457 104 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 PSG4Q00888 419 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 CD83Q01151 205 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SSBP1Q04837 148 aaKnown RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 PMPCAQ10713 525 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 KRTAP27-1Q3LI81 207 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 TMPRSS7Q7RTY8 843 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM178AQ8NBL3 297 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 OR56B4Q8NH76 319 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 AKR7LQ8NHP1 331 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 FNDC9Q8TBE3 224 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 AKAP1Q92667 903 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SEH1LQ96EE3 360 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 FYTTD1Q96QD9 318 aaKnown RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 GAL3ST1Q99999 423 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 OR10A2Q9H208 303 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 CALHM2Q9HA72 323 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 BCO1Q9HAY6 547 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM14DPA8MWL7 114 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 RPL36A-HNRNPH2H7BZ11 118 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 MTRF1O75570 445 aaKnown RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 DHRS3O75911 302 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 ALX3O95076 343 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 YES1P07947 543 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 PRF1P14222 555 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 THBS4P35443 961 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 STK11Q15831 433 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 GSG1Q2KHT4 349 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SNAI3Q3KNW1 292 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 MOGAT2Q3SYC2 334 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 NRN1LQ496H8 165 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 RAB12Q6IQ22 244 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SLC16A14Q7RTX9 510 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 OR52H1Q8NGJ2 320 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SSC4DQ8WTU2 575 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SPACA5Q96QH8 159 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 OR2H1Q9GZK4 316 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 TP63Q9H3D4 680 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 LDAHQ9H6V9 325 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 SCPEP1Q9HB40 452 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 MOV10Q9HCE1 1003 aaKnown RBP8.39□□□□□ -1.07
TRIM55-201ENST00000276573 LIPGQ9Y5X9 500 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 CNTRLQ7Z7A1 2325 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 TRGV5A0A0B4J1U4 118 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 OR6C65A6NJZ3 312 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 RAB27BO00194 218 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 FARS2O95363 451 aaKnown RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 IGHV3-9P01782 118 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 HCKP08631 526 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 CSF1P09603 554 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 CPN1P15169 458 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 ARF1P84077 181 aaKnown RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 UNC119Q13432 240 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 RNPS1Q15287 305 aaKnown RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 C3AR1Q16581 482 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 ZFP69Q49AA0 526 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 GLIPR1L1Q6UWM5 242 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 IGFL2Q6UWQ7 119 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 CHMP1BQ7LBR1 199 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 CDH24Q86UP0 819 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 TCTE3Q8IZS6 198 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 FDCSPQ8NFU4 85 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 PP6455Q8WZ26 134 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 ITFG2Q969R8 447 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 FAM46BQ96A09 425 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 C10orf35Q96D05 121 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF486Q96H40 463 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 RNF170Q96K19 258 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 MED28Q9H204 178 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 EXO5Q9H790 373 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 NKIRAS2Q9NYR9 191 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
TRIM55-201ENST00000276573 MRPS28Q9Y2Q9 187 aaKnown RBP8.38□□□□□ -1.07
TRIM55-201ENST00000276573 MEIS3P1A6NDR6 274 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 WIPF3A6NGB9 483 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 LPLP06858 475 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 MMP7P09237 267 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 AKAIN1P0CW23 69 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 GTF2F2P13984 249 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 FAUP35544 74 aaKnown RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 HGFACQ04756 655 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 UBE2V2Q15819 145 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF260Q3ZCT1 412 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 CDNFQ49AH0 187 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 SFRP5Q5T4F7 317 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 AWAT2Q6E213 333 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms