RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ETV1P50549 477 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 CCL8P80075 99 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 FAM3AP98173 230 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 GALEQ14376 348 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 OR8G5Q8NG78 346 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 RORBQ92753 470 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 ALG8Q9BVK2 526 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 ISG20L2Q9H9L3 353 aaKnown RBP10.86□□□□□ -0.67
SS18-202ENST00000269138 PLCXD1Q9NUJ7 323 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 PSORS1C1Q9UIG5 152 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 OR52A1Q9UKL2 312 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 CREBBPQ92793 2442 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 hCG_38984A0A1B0GV85 526 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 H0YL77 283 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 TTRP02766 147 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 MT-ND5P03915 603 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 SELEP16581 610 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 GSK3AP49840 483 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 HNRNPA0Q13151 305 aaKnown RBP10.85□□□□□ -0.67
SS18-202ENST00000269138 TNK1Q13470 666 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 OR56B2PQ8NGI1 322 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 OR51E1Q8TCB6 317 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
SS18-202ENST00000269138 NEU4Q8WWR8 484 aaPredicted RBP10.85□□□□□ -0.67
SS18-202ENST00000269138 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 CNBD2Q96M20 576 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 BARX1Q9HBU1 254 aaPredicted RBP10.85□□□□□ -0.67
SS18-202ENST00000269138 CYSLTR2Q9NS75 346 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
SS18-202ENST00000269138 CLEC2DQ9UHP7 191 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 RAB26Q9ULW5 256 aa10.85□□□□□ -0.67
SS18-202ENST00000269138 MLNRO43193 412 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 HLA-DPB1P04440 258 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 COL8A2P25067 703 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ACKR3P25106 362 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 DCKP27707 260 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 RBMXP38159 391 aaKnown RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 LIPAP38571 399 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ST3GAL4Q11206 333 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 SNCBQ16143 134 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 CLEC12BQ2HXU8 276 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ODF4Q2M2E3 257 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 SHEQ5VZ18 495 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PRSS57Q6UWY2 283 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 AHSA2Q719I0 299 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 FAM220AQ7Z4H9 259 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ELMOD2Q8IZ81 293 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PRSS35Q8N3Z0 413 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 OR2Z1Q8NG97 314 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 OR10AD1Q8NGE0 317 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 SGCDQ92629 289 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PELI1Q96FA3 418 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 TMEM80Q96HE8 168 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 Q96MF0 132 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ZNF184Q99676 751 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 JAM3Q9BX67 310 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PPP1R3EQ9H7J1 279 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 GPR84Q9NQS5 396 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 INPP5EQ9NRR6 644 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 FKBP14Q9NWM8 211 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 NKIRAS2Q9NYR9 191 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 DIMT1Q9UNQ2 313 aaKnown RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 SNX5Q9Y5X3 404 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 A0A0U1RQV5 110 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 A0A1B0GTI1 187 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 EFCAB10A6NFE3 127 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 E9PI62 339 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 SLC1A7O00341 560 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 P2RY10O00398 339 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 IGLV3-1P01715 115 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ERCC1P07992 297 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 ADH4P08319 380 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 TACSTD2P09758 323 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PIPP12273 146 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 DAOP14920 347 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 CA6P23280 308 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 KIR3DL2P43630 455 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 NANOS3P60323 173 aaKnown RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 CARTPTQ16568 116 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 PCGF3Q3KNV8 242 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 KCTD20Q7Z5Y7 419 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 TGIF2LYQ8IUE0 185 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 OR13G1Q8NGZ3 307 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 DVL3Q92997 716 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 YIPF5Q969M3 257 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 ELMOD3Q96FG2 381 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 FAM71F1Q96KD3 344 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 RGCCQ9H4X1 137 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms