RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TPRP12270 2363 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 XRCC3O43542 346 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 NXPH3O95157 252 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 ATF1P18846 271 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 HRH1P35367 487 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 UBE2IP63279 158 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 ZDHHC23Q8IYP9 409 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 MOGAT1Q96PD6 335 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 EXOGQ9Y2C4 368 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 CYR61O00622 381 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 CYB5BO43169 146 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 ST8SIA3O43173 380 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 PI3P19957 117 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 HAAOP46952 286 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 FLVCR1Q9Y5Y0 555 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 TRIOBPQ9H2D6 2365 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 SIRPB1O00241 398 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 SH2D1BO14796 132 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 GPANK1O95872 356 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 TBPP20226 339 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 CNR1P21554 472 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 INSL4Q14641 139 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 FRZBQ92765 325 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
CDH3-201ENST00000264012 TRAPPC4Q9Y296 219 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 R4GN57 208 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 PXT1Q8NFP0 134 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 PP6455Q8WZ26 134 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 C4orf45Q96LM5 186 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 ARID1AO14497 2285 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 ZNF816-ZNF321PA0A0X1KG74 233 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 NDUFB7P17568 137 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 AKR1C1Q04828 323 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 FZD5Q13467 585 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 hCG_1809904A0A1W2PP81 198 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 A0A1W2PPE2 198 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 A0A1W2PR64 198 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 A0A1W2PRV1 198 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 HBE1P02100 147 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 ARL3P36405 182 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 NKX2-1P43699 371 aaPredicted RBP12.56□□□□□ -0.4
CDH3-201ENST00000264012 MMP15P51511 669 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 TLE4Q04727 773 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 BAXQ07812 192 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 CST9LP1Q5W188 147 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 OR4C16Q8NGL9 310 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 OR1F12Q8NHA8 337 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 C12orf10Q9HB07 376 aa12.56□□□□□ -0.4
CDH3-201ENST00000264012 PCMT1P22061 227 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 GALP22466 123 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 AADACP22760 399 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SERPINF1P36955 418 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 ZNF416Q9BWM5 594 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
CDH3-201ENST00000264012 TRGV5A0A0B4J1U4 118 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 A0A1B0GUH1 482 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 AGFG1P52594 562 aaKnown RBP12.55□□□□□ -0.4
CDH3-201ENST00000264012 CD226Q15762 336 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 TRILQ7L0X0 811 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 D2HGDHQ8N465 521 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 RER1O15258 196 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 WDR1O75083 606 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 THBS4P35443 961 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 FABP6P51161 128 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 ZNF92Q03936 586 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 WDR74Q6RFH5 385 aaPredicted RBP12.55□□□□□ -0.4
CDH3-201ENST00000264012 KANSL1Q7Z3B3 1105 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 BTLAQ7Z6A9 289 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 MARCH1Q8TCQ1 289 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 ZFP64Q9NPA5 681 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SLC39A9Q9NUM3 307 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 MEIKINA0A087WXM9 373 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 OR4E1P0C645 316 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 GLRA1P23415 457 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
CDH3-201ENST00000264012 KIR2DL3P43628 341 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SSPNQ14714 243 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 SCARB1Q8WTV0 552 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 BOD1Q96IK1 185 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 FLRT3Q9NZU0 649 aa12.55□□□□□ -0.4
CDH3-201ENST00000264012 TRAV17A0A0B4J275 112 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 GMDSO60547 372 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms