RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GNPNAT1Q96EK6 184 aaPredicted RBP17.07■□□□□ 0.32
PTPRE-201ENST00000254667 CLEC1BQ9P126 229 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 SLC23A1Q9UHI7 598 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 TMEFF2Q9UIK5 374 aaPredicted RBP17.07■□□□□ 0.32
PTPRE-201ENST00000254667 WDR1O75083 606 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 GNB3P16520 340 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 GALP22466 123 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 RHBDD2Q6NTF9 364 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 DRAM2Q6UX65 266 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR2AK2Q8NG84 335 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 OR2G3Q8NGZ4 309 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
PTPRE-201ENST00000254667 KLK10O43240 276 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 SPEM2Q0P670 501 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 NUDCD2Q8WVJ2 157 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 ING1Q9UK53 422 aaPredicted RBP17.06■□□□□ 0.32
PTPRE-201ENST00000254667 LRP12Q9Y561 859 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 FUCA1P04066 466 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 CD300LDQ6UXZ3 194 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 MARC2Q969Z3 335 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 ZFP64Q9NPA5 681 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 LGALS8O00214 317 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 XRCC3O43542 346 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 RAB5CP51148 216 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 GSG1Q2KHT4 349 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 DEGS2Q6QHC5 323 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 Q8IYB0 196 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 DEFB108BQ8NET1 73 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 ST7LQ8TDW4 575 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 CCSO14618 274 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 TNFSF14O43557 240 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 FABP6P51161 128 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 HMGA2P52926 109 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 A0A1B0GUH1 482 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 TTC3P53804 2025 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 FAM117AQ9C073 453 aa17.06■□□□□ 0.32
PTPRE-201ENST00000254667 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 FCGR2CP31995 323 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 AMER3Q8N944 861 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 OR1J1Q8NGS3 322 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 AKR7LQ8NHP1 331 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 DDOQ99489 341 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 CSAG2Q9Y5P2 127 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 TEX51A0A1B0GUA7 166 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 OPRM1P35372 400 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 ACOT7LQ6ZUV0 252 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 CIB3Q96Q77 187 aaPredicted RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 PLEKHA2Q9HB19 425 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 PURGQ9UJV8 347 aaKnown RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 SNTB1Q13884 538 aaKnown RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 FAM199XQ6PEV8 388 aaPredicted RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 SLC17A5Q9NRA2 495 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 F5P12259 2224 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 FAM109BQ6ICB4 259 aaPredicted RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
PTPRE-201ENST00000254667 TXN2Q99757 166 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 PIGMQ9H3S5 423 aa17.05■□□□□ 0.32
PTPRE-201ENST00000254667 NXPH3O95157 252 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 PSMB6P28072 239 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 YBX1P67809 324 aaKnown RBP17.04■□□□□ 0.32
PTPRE-201ENST00000254667 TERB2Q8NHR7 220 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 NUBPLQ8TB37 319 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 SMIM4Q8WVI0 70 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 RNF150Q9ULK6 438 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 NUPL2O15504 423 aaKnown RBP17.04■□□□□ 0.32
PTPRE-201ENST00000254667 TNFRSF1AP19438 455 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 EMP3P54852 163 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 RAB1AP62820 205 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 TIGD3Q6B0B8 471 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 WDR74Q6RFH5 385 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-201ENST00000254667 GPR32P1Q8NGA4 272 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 UBR3Q6ZT12 1888 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 SDCBPO00560 298 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-201ENST00000254667 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-201ENST00000254667 CD3DP04234 171 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 SRD5A2P31213 254 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 CDAP32320 146 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 HRH1P35367 487 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 MEOX1P50221 254 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 PRSS41Q7RTY9 318 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 TAAR6Q96RI8 345 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 FN3KRPQ9HA64 309 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 SMLR1H3BR10 107 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 CLDN20P56880 219 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 CDC20Q12834 499 aa17.04■□□□□ 0.32
PTPRE-201ENST00000254667 CLN5O75503 358 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 FAHP16930 419 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 GABRB1P18505 474 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 GALNSP34059 522 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 TESK1Q15569 626 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 PLA2G3Q9NZ20 509 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 E5RGE8 158 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 ZNF354AO60765 605 aaPredicted RBP17.03■□□□□ 0.32
PTPRE-201ENST00000254667 C1QAP02745 245 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 FGF9P31371 208 aaPredicted RBP17.03■□□□□ 0.32
PTPRE-201ENST00000254667 TMEM268Q5VZI3 342 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 IL34Q6ZMJ4 242 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 CADM3Q8N126 398 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 MFSD4AQ8N468 514 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms