RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 Q6ZSR6 202 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 SLC37A2Q8TED4 501 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 ASB5Q8WWX0 329 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
SF1-201ENST00000227503 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 TRBV6-7A0A0A0MS04 114 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 EIF1AYO14602 144 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 CSTAP01040 98 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 S100A2P29034 98 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 EIF1AXP47813 144 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 RAB5CP51148 216 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 LCN10Q6JVE6 187 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 CLEC18BQ6UXF7 455 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 GPX7Q96SL4 187 aaPredicted RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 NICN1Q9BSH3 213 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 DOK5Q9P104 306 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 LRP4O75096 1905 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 TSPAN15O95858 294 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 PAX6P26367 422 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 YPEL5P62699 121 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 CCINQ13939 588 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 ZNF574Q6ZN55 896 aaPredicted RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 SLC22A18ASQ8N1D0 253 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 CHST5Q9GZS9 411 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 C5orf66Q9H5L9 145 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 Q9N2J8 555 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 GRHPRQ9UBQ7 328 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 RAB27BO00194 218 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 MPZL1O95297 269 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 CSTBP04080 98 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 GRK6P43250 576 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 GPR3P46089 330 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 RPL18Q07020 188 aaKnown RBP12.55□□□□□ -0.4
SF1-201ENST00000227503 RASGEF1BQ0VAM2 473 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 GUK1Q16774 197 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 BCORP1Q8N888 145 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 TAAR9Q96RI9 348 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 G6PC3Q9BUM1 346 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 NMES1Q9C002 83 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 FAM86C1Q9NVL1 165 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
SF1-201ENST00000227503 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 RAMP1O60894 148 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 TXNDC12O95881 172 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 SULT1A2P50226 295 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 ZNF84P51523 738 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 RSU1Q15404 277 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 GALNTL5Q7Z4T8 443 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 OR13H1Q8NG92 308 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 LPAR4Q99677 370 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 RFNGQ9Y644 331 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 TMEM127O75204 238 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 OR2C1O95371 312 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 TNFP01375 233 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 HOXA5P20719 270 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 CTHP32929 405 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 SLC6A9P48067 706 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 DNASE1L1P49184 302 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 SCAND1P57086 179 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 PRPS1P60891 318 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 ERV3-1Q14264 604 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 ZNF679Q8IYX0 411 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 C16orf52Q8NHV5 167 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 GFOD1Q9NXC2 390 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 GAR1Q9NY12 217 aaKnown RBP12.54□□□□□ -0.4
SF1-201ENST00000227503 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 WDFY3Q8IZQ1 3526 aa12.54□□□□□ -0.4
SF1-201ENST00000227503 SLC31A2O15432 143 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 WISP1O95388 367 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 AKT2P31751 481 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 BTG2P78543 158 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 UNC119Q13432 240 aa12.53□□□□□ -0.4
SF1-201ENST00000227503 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms