RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MICBQ29980 383 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 CCDC157Q569K6 752 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 WDR74Q6RFH5 385 aaPredicted RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 GLIPR1L1Q6UWM5 242 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 TMPRSS9Q7Z410 1059 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 ANKRD37Q7Z713 158 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 NOXO1Q8NFA2 376 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 NARS2Q96I59 477 aaKnown RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 C1orf147Q96MC9 270 aaPredicted RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 NICN1Q9BSH3 213 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 CSAG2Q9Y5P2 127 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 USP34Q70CQ2 3546 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 SEC16AO15027 2179 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 EXPH5Q8NEV8 1989 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 A0A0A6YYD4 124 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 A0A0B4J2A0 478 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 NUDT19A8MXV4 375 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 CDC14BO60729 498 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 ATG12O94817 140 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PABPC1L2AQ5JQF8 200 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PDSS1Q5T2R2 415 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 RHBDD2Q6NTF9 364 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 OR5AS1Q8N127 324 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 OR1S2Q8NGQ3 325 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PMEPA1Q969W9 287 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 SCGB3A2Q96PL1 93 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 OCSTAMPQ9BR26 566 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 ZNF768Q9H5H4 540 aaKnown RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 SDHAF3Q9NRP4 125 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 TMEM100Q9NV29 134 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 SHPKQ9UHJ6 478 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 POLR1DQ9Y2S0 133 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 IGLV3-32A0A0A0MS00 114 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 C13orf42A0A1B0GVH6 325 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 EFNA2O43921 213 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 PGAM2P15259 253 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 CCL1P22362 96 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 CBX5P45973 191 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
SRP54-201ENST00000216774 UNQ6126/PRO20091Q6UXV3 157 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 ABHD12BQ7Z5M8 362 aaPredicted RBP11.78□□□□□ -0.52
SRP54-201ENST00000216774 GTPBP8Q8N3Z3 284 aaPredicted RBP11.78□□□□□ -0.52
SRP54-201ENST00000216774 TMEM104Q8NE00 496 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 THAP3Q8WTV1 239 aaPredicted RBP11.78□□□□□ -0.52
SRP54-201ENST00000216774 DCUN1D4Q92564 292 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 NUDT22Q9BRQ3 303 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 RAB18Q9NP72 206 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 ASF1BQ9NVP2 202 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 GPR132Q9UNW8 380 aa11.78□□□□□ -0.52
SRP54-201ENST00000216774 TMEM218A2RU14 115 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 MPIG6BO95866 241 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 GABREP78334 506 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 EIF3IQ13347 325 aaKnown RBP11.77□□□□□ -0.52
SRP54-201ENST00000216774 BAP18Q8IXM2 172 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 ESX1Q8N693 406 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 OR8B12Q8NGG6 310 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 OR56B1Q8NGI3 324 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 OR2I1PQ8NGU4 316 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 TMEM41AQ96HV5 264 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 RNF126Q9BV68 326 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 TMEM59Q9BXS4 323 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 LMAN1LQ9HAT1 526 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 KLRF1Q9NZS2 232 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 PURGQ9UJV8 347 aaKnown RBP11.77□□□□□ -0.52
SRP54-201ENST00000216774 GON4LQ3T8J9 2241 aa11.77□□□□□ -0.52
SRP54-201ENST00000216774 FAM74A7A6NL05 159 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 SFT2D2O95562 160 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 PLATP00750 562 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 HEXBP07686 556 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 LYL1P12980 280 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 ICAM2P13598 275 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 ABOP16442 354 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 BCKDHBP21953 392 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 FPR2P25090 351 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 P2RY4P51582 365 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
SRP54-201ENST00000216774 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 FAM74A3Q4VXF1 159 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 RABEPKQ7Z6M1 372 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 RTN4RL2Q86UN3 420 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 COMMD2Q86X83 199 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 SVBPQ8N300 66 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 OR5L2Q8NGL0 311 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 RNF141Q8WVD5 230 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 C5orf66Q9H5L9 145 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 GPR84Q9NQS5 396 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 SLC39A1Q9NY26 324 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 FER1L5A0AVI2 2057 aa11.77□□□□□ -0.53
SRP54-201ENST00000216774 TRBV11-1A0A0K0K1C0 115 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms