RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PGAP1Q75T13 922 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 SGK3Q96BR1 496 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 MBD6Q96DN6 1003 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 REEP6Q96HR9 211 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 SOX7Q9BT81 388 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PBOV1Q9GZY1 135 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 ISG20L2Q9H9L3 353 aaKnown RBP11.28□□□□□ -0.6
GTF3A-209ENST00000640289 G6PC2Q9NQR9 355 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PSORS1C1Q9UIG5 152 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 ITGB1BP2Q9UKP3 347 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 R4GMQ9 66 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
GTF3A-209ENST00000640289 ROS1P08922 2347 aa11.27□□□□□ -0.6
GTF3A-209ENST00000640289 H7C417 338 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 J3QLW9 94 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 XRCC2O43543 280 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 LILRA1O75019 489 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SULT1C4O75897 302 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 BMP4P12644 408 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF19P17023 458 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 DCKP27707 260 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 ETV1P50549 477 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 MMP15P51511 669 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 MMP16P51512 607 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 ST3GAL4Q11206 333 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 TIGD6Q17RP2 521 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 Q6ZR03 302 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF540Q8NDQ6 660 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SGCDQ92629 289 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 RORBQ92753 470 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 TMEM80Q96HE8 168 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 LYZL4Q96KX0 146 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SIGLEC11Q96RL6 698 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 GSX2Q9BZM3 304 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 OR10A2Q9H208 303 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 RASSF4Q9H2L5 321 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SP140LQ9H930 580 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 MSL2Q9HCI7 577 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 INPP5EQ9NRR6 644 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 FKBP14Q9NWM8 211 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 UBAP1Q9NZ09 502 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 CNOT2Q9NZN8 540 aaKnown RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 NUFIP1Q9UHK0 495 aaKnown RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.61
GTF3A-209ENST00000640289 SLC22A13Q9Y226 551 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 RTTNQ86VV8 2226 aa11.27□□□□□ -0.61
GTF3A-209ENST00000640289 IRGMA1A4Y4 181 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 EFCAB10A6NFE3 127 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 ZSCAN5BA6NJL1 495 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 LOC110117498-PIK3R3F6TDL0 507 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 LY6HO94772 140 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 TTRP02766 147 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 PIPP12273 146 aaPredicted RBP11.26□□□□□ -0.61
GTF3A-209ENST00000640289 PAX1P15863 534 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
GTF3A-209ENST00000640289 ATP5J2P56134 94 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 ACTA2P62736 377 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 ACTG2P63267 376 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 FAM3AP98173 230 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 MOGQ16653 247 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 ODF4Q2M2E3 257 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 STX19Q8N4C7 294 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 PELI1Q96FA3 418 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 TRMT61AQ96FX7 289 aaKnown RBP11.26□□□□□ -0.61
GTF3A-209ENST00000640289 PAK1IP1Q9NWT1 392 aaPredicted RBP11.26□□□□□ -0.61
GTF3A-209ENST00000640289 CLEC2DQ9UHP7 191 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 CSMD1Q96PZ7 3565 aa11.26□□□□□ -0.61
GTF3A-209ENST00000640289 APCP25054 2843 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 hCG_38984A0A1B0GV85 526 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 PLSCR5A0PG75 271 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 ACOD1A6NK06 481 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 C17orf100A8MU93 164 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 IQCF6A8MYZ5 107 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 PTGES3LE9PB15 166 aa11.25□□□□□ -0.61
GTF3A-209ENST00000640289 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms