RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SOX14O95416 240 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SPARCP09486 303 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF3P17036 446 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SPI1P17947 270 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 RPS27P42677 84 aaKnown RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SEC61A1P61619 476 aaKnown RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 ACTG1P63261 375 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 TAF13Q15543 124 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 ARMCX4Q5H9R4 360 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 NLRC3Q7RTR2 1065 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 OR10G2Q8NGC3 310 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 OR4Q3Q8NH05 313 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNRF4Q8WWF5 429 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 NEIL1Q96FI4 390 aaPredicted RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SLC6A7Q99884 636 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 SSBP3Q9BWW4 388 aaPredicted RBP13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 ARMC1Q9NVT9 282 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 VNN3Q9NY84 501 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 PPIAL4AQ9Y536 164 aa13.04□□□□□ -0.32
PTPRVP-204ENST00000639439 NBEAL1Q6ZS30 2694 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 GGT3PA6NGU5 568 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF878C9JN71 531 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 GMDSO60547 372 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 T-ENOLP0DO92 83 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 SLC15A1P46059 708 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF92Q03936 586 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 MAB21L1Q13394 359 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 OR8G1Q15617 311 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 LYPD4Q6UWN0 246 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 BTNL3Q6UXE8 466 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 SPERTQ8NA61 448 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 PLPP7Q8NBV4 271 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 OR8B3Q8NGG8 313 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 OR6K6Q8NGW6 343 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 TEX47Q8TBZ9 253 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 GIPC3Q8TF64 312 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 DVL3Q92997 716 aaPredicted RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 CCDC124Q96CT7 223 aaKnown RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 SLAMF6Q96DU3 332 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 OR8B2Q96RD0 313 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 CHID1Q9BWS9 393 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 SP140LQ9H930 580 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 CMC2Q9NRP2 79 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 MRPL15Q9P015 296 aaKnown RBP13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 NUP50Q9UKX7 468 aa13.03□□□□□ -0.32
PTPRVP-204ENST00000639439 IGHV3-64DA0A0J9YX35 117 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 AQP12BA6NM10 295 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 ZNF205O95201 554 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 CST1P01037 141 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 APOC1P02654 83 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 GYPBP06028 91 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 PPIAL4GP0DN37 164 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 CA6P23280 308 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 GRK5P34947 590 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 PMELP40967 661 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 PRKXP51817 358 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 PRSS12P56730 875 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 GNB2P62879 340 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 GRB2P62993 217 aaKnown RBP13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 PAX8Q06710 450 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 MZT1Q08AG7 82 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 KCNJ8Q15842 424 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 SNAI3Q3KNW1 292 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 AQP12AQ8IXF9 295 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 ADAT1Q9BUB4 502 aaKnown RBP13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 TOR3AQ9H497 397 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 FN3KRPQ9HA64 309 aa13.02□□□□□ -0.33
PTPRVP-204ENST00000639439 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 H3BN98 237 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 ACOT8O14734 319 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 XRCC2O43543 280 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 FAM20BO75063 409 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 PTBP3O95758 552 aaKnown RBP13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 DDOSTP39656 456 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 PITPNBP48739 271 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 LINC01590Q5TEZ4 76 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 DCDC5Q6ZRR9 648 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 OR2AE1Q8NHA4 323 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
PTPRVP-204ENST00000639439 GCDHQ92947 438 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms