RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 Q499Y3 187 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 ACSM3Q53FZ2 586 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 ZMAT1Q5H9K5 638 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 C22orf42Q6IC83 251 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 UNQ9370/PRO34162Q6UXP9 181 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 Q6ZSR3 168 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 CEACAM19Q7Z692 300 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 PAQR4Q8N4S7 273 aaPredicted RBP8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 OR51A4Q8NGJ6 313 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 OR1J2Q8NGS2 313 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 OR51E1Q8TCB6 317 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 ITLN2Q8WWU7 325 aaPredicted RBP8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 APOBEC3DQ96AK3 386 aaPredicted RBP8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 SGK3Q96BR1 496 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 MUCL1Q96DR8 90 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 LYZL4Q96KX0 146 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 OR14A2Q96R54 314 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 C1QTNF6Q9BXI9 259 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 OR10A2Q9H208 303 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 RGCCQ9H4X1 137 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 RNF167Q9H6Y7 350 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 NPAP1Q9NZP6 1156 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 HHLA2Q9UM44 414 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 N6AMT1Q9Y5N5 214 aa8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 SMG1Q96Q15 3661 aaKnown RBP8.3□□□□□ -1.08
CACNA1A-223ENST00000636058 NBASA2RRP1 2371 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 TRBV5-7A0A0A0MS05 114 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 A0A1B0GVI7 797 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 VGLL3A8MV65 326 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 J3QW42 95 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 TBX1O43435 398 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 XRCC2O43543 280 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 SYT7O43581 403 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ZG16O60844 167 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ATE1O95260 518 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 THBDP07204 575 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 UCHL1P09936 223 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 OCM2P0CE71 109 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF35P13682 527 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 MAPK3P27361 379 aaPredicted RBP8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 PCSK6P29122 969 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 MAGEB1P43366 347 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 SORDQ00796 357 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 TFF3Q07654 80 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 SPCS2Q15005 226 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 GLYATL3Q5SZD4 288 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 XKRXQ6PP77 449 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 PAMR1Q6UXH9 720 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 DOK3Q7L591 496 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF101Q8IZC7 436 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF808Q8N4W9 903 aaPredicted RBP8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 NDNFQ8TB73 568 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 PHYHIPQ92561 330 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 THRSPQ92748 146 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 SPSB4Q96A44 273 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 LRRC46Q96FV0 321 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 KCTD7Q96MP8 289 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 DERL3Q96Q80 235 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 KCNS3Q9BQ31 491 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 SOX7Q9BT81 388 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 PPIL3Q9H2H8 161 aaKnown RBP8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 CDH20Q9HBT6 801 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 GPR84Q9NQS5 396 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 TBCCD1Q9NVR7 557 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 GSTK1Q9Y2Q3 226 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 PCNX1Q96RV3 2341 aa8.29□□□□□ -1.08
CACNA1A-223ENST00000636058 HIVEP3Q5T1R4 2406 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 LOC390937A0A1W2PQ73 354 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 SHISA3A0PJX4 238 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 H3BSH0 61 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 PIN1P1O15428 100 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 SMPD2O60906 423 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 CLDN14O95500 239 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 NGFP01138 241 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 RAF1P04049 648 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF12P17014 697 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 CALRP27797 417 aaKnown RBP8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 SOX2P48431 317 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF83P51522 516 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 NAAAQ02083 359 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 ZNF92Q03936 586 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 CNPY1Q3B7I2 92 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 GFOD2Q3B7J2 385 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 FAM27D1Q5T7N8 215 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 RFPL4BQ6ZWI9 263 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 USP43Q70EL4 1123 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 COMMD2Q86X83 199 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 CCDC54Q8NEL0 328 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 KBTBD8Q8NFY9 601 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 OR13C3Q8NGS6 347 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 OR14K1Q8NGZ2 314 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 OR2AE1Q8NHA4 323 aa8.28□□□□□ -1.08
CACNA1A-223ENST00000636058 TSEN15Q8WW01 171 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms