RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FAM166BA8MTA8 275 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DEFB108AA8MXU0 73 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA6L19H0YKK7 550 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 KLRC4-KLRK1H3BQV0 150 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 UBXN8O00124 270 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 AP3B1O00203 1094 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 BCKDKO14874 412 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ARPC3O15145 178 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 HCN1O60741 890 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TNFSF13O75888 250 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 OR2J2O76002 312 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 MYO1DO94832 1006 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ETHE1O95571 254 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 SERPINA6P08185 405 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 IGFBP1P08833 259 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 WNT2P09544 360 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RNH1P13489 461 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 PGCP20142 388 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TBXA2RP21731 343 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 UQCRC2P22695 453 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 IVDP26440 423 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL4P36578 427 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 PEX19P40855 299 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 MAGEA5P43359 124 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 GSK3BP49841 420 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 SSR4P51571 173 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ARHGDIAP52565 204 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RAB38P57729 211 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 OR4D2P58180 307 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TPM4P67936 248 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 EBPQ15125 230 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 CHI3L2Q15782 390 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TTLL9Q3SXZ7 439 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM74A3Q4VXF1 159 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C1orf185Q5T7R7 199 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ZC2HC1BQ5TFG8 222 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 SLX4IPQ5VYV7 408 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 STEAP4Q687X5 459 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DUPD1Q68J44 220 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM225Q6GV28 225 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ADNP2Q6IQ32 1131 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 EMBQ6PCB8 327 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TTC23LQ6PF05 361 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 AGTRAPQ6RW13 159 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C4orf22Q6V702 233 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DGAT2L6Q6ZPD8 337 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DNM1P46Q6ZS02 220 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 CYS1Q717R9 158 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TMUB2Q71RG4 321 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ABHD13Q7L211 337 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 PEX26Q7Z412 305 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM17Q86X19 198 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 LRRC75A-AS1Q8N1F1 130 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF10Q8N5U6 811 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 UBL4BQ8N7F7 174 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 CSNK1G2-AS1Q8NCQ2 148 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 OR13C2Q8NGS9 318 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 NEIL3Q8TAT5 605 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 NUBPLQ8TB37 319 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 MIPOL1Q8TD10 442 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF721Q8TF20 911 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 EEF1AKMT1Q8WVE0 214 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C1orf54Q8WWF1 131 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RNASE6Q93091 150 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 LRRC45Q96CN5 670 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RAB3CQ96E17 227 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RMND5BQ96G75 393 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 SNF8Q96H20 258 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C18orf12Q96KH6 178 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C7orf34Q96L11 122 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF597Q96LX8 424 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 C9orf85Q96MD7 179 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 SECISBP2Q96T21 854 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RHBGQ9H310 441 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 JPT2Q9H910 190 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 PARVBQ9HBI1 364 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 LYRM4Q9HD34 91 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 AMBNQ9NP70 447 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 KCNJ16Q9NPI9 418 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 FBXO6Q9NRD1 293 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM120CQ9NX05 1096 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 QPCTLQ9NXS2 382 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 CLCF1Q9UBD9 225 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 GNG12Q9UBI6 72 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 B4GALT7Q9UBV7 327 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF629Q9UEG4 869 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 FBXO5Q9UKT4 447 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RPH3ALQ9UNE2 315 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 YARS2Q9Y2Z4 477 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DSCAMO60469 2012 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 HEATR5AQ86XA9 2040 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 DNAH7Q8WXX0 4024 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 NINQ8N4C6 2090 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 USF3Q68DE3 2245 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TRAV26-1A0A087WT03 109 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 A0A0A6YYD5 115 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TRGV5A0A0B4J1U4 118 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 NDUFAF8A1L188 74 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZSCAN5BA6NJL1 495 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL37AP8A6NKH3 93 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms