RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR2F1Q13607 317 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 OR2AK2Q8NG84 335 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 DYNC2LI1Q8TCX1 351 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 ORAI1Q96D31 301 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 DLL4Q9NR61 685 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 A0A087WUJ7 227 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 H0Y8G0 127 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 PEX11BO96011 259 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 PIGMQ9H3S5 423 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 FBXO8Q9NRD0 319 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 JTBO76095 146 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 EPHA2P29317 976 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 CDAP32320 146 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 SNRPNP63162 240 aaKnown RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 TINAGL1Q9GZM7 467 aaPredicted RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 FLVCR2Q9UPI3 526 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 ST3GAL6Q9Y274 331 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 DDX60LQ5H9U9 1706 aaKnown RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 KIAA0100Q14667 2235 aaKnown RBP11.57□□□□□ -0.56
SCN8A-209ENST00000627620 GNB2P62879 340 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 NOXO1Q8NFA2 376 aa11.57□□□□□ -0.56
SCN8A-209ENST00000627620 TAF1P21675 1872 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 CCDC187A0A096LP49 1063 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 MYBPHQ13203 477 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 MFSD4AQ8N468 514 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 TP53I13Q8NBR0 393 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 AKR7LQ8NHP1 331 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 MRPS24Q96EL2 167 aaKnown RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 ALKBH3Q96Q83 286 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 PRDM7Q9NQW5 492 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 PSMB6P28072 239 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 CSN1S1P47710 185 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 CEACAM16Q2WEN9 425 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 KTI12Q96EK9 354 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 ARPC3O15145 178 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 PIAS2O75928 621 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 BAMBIQ13145 260 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 OR11G2Q8NGC1 345 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 TRPM3Q9HCF6 1732 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 MGMTP16455 207 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 GABRB1P18505 474 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 DBPQ10586 325 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 OXA1LQ15070 435 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 DMRTC1Q5HYR2 192 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 DBX2Q6ZNG2 339 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 GNPNAT1Q96EK6 184 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 KPTNQ9Y664 436 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 SSC5DA1L4H1 1573 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 LOXHD1Q8IVV2 1947 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 NME1P15531 152 aaKnown RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 UBAC2Q8NBM4 344 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 MARCH1Q8TCQ1 289 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 KISS1RQ969F8 398 aaPredicted RBP11.56□□□□□ -0.56
SCN8A-209ENST00000627620 ARHGDIGQ99819 225 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 GSX2Q9BZM3 304 aa11.56□□□□□ -0.56
SCN8A-209ENST00000627620 TJP1Q07157 1748 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 LRP3O75074 770 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 TPBGQ13641 420 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 H3F3CQ6NXT2 135 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 OSR2Q8N2R0 312 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 CORO2AQ92828 525 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 COMMD5Q9GZQ3 224 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 AUNIPQ9H7T9 357 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 SERGEFQ9UGK8 458 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 OR5H14A6NHG9 310 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 XRCC3O43542 346 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 OR4E1P0C645 316 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 UBE2IP63279 158 aaKnown RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 SKA3Q8IX90 412 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 NMES1Q9C002 83 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 NTN4Q9HB63 628 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 ZNF331Q9NQX6 463 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 SHISA8B8ZZ34 492 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 IAPPP10997 89 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 FAHP16930 419 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 F2RP25116 425 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 OR1C1Q15619 314 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 LCN15Q6UWW0 184 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 KDF1Q8NAX2 398 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 TMED6Q8WW62 240 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 ZNF416Q9BWM5 594 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 OR5G3P0C626 314 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 NOVA1P51513 510 aaKnown RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 SPATA46Q5T0L3 261 aa11.55□□□□□ -0.56
SCN8A-209ENST00000627620 RGS7BPQ6MZT1 257 aaPredicted RBP11.55□□□□□ -0.56
SCN8A-209ENST00000627620 TMEM104Q8NE00 496 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms