RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SPACA6W5XKT8 324 aa13.58□□□□□ -0.24
PMS1-221ENST00000624204 GPR75O95800 540 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TIMP1P01033 207 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 DDTP30046 118 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 FCGR2CP31995 323 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 VIPR2P41587 438 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 ACTR1BP42025 376 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 RPS4XP62701 263 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 GFI1BQ5VTD9 330 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 AQP3Q92482 292 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TSPAN32Q96QS1 320 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 LANCL2Q9NS86 450 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TSTD3H0UI37 97 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 XKRYO14609 159 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 CST4P01036 141 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 QDPRP09417 244 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TAS2R60P59551 318 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TOMM34Q15785 309 aaPredicted RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 TEX30Q5JUR7 227 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 LINC00346Q8IVM7 164 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 TERB2Q8NHR7 220 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 MR1Q95460 341 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 SPACA7Q96KW9 195 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 C5orf66Q9H5L9 145 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 MRPL22Q9NWU5 206 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 POMT1Q9Y6A1 747 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 ZNF726A6NNF4 738 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 HIST1H1BP16401 226 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 S1PR1P21453 382 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 GJA4P35212 333 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 RPS23P62266 143 aaKnown RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 TLE1Q04724 770 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 CRIPAKQ8N1N5 446 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 NPRL2Q8WTW4 380 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 ZNF107Q9UII5 783 aaPredicted RBP13.57□□□□□ -0.24
PMS1-221ENST00000624204 INSL6Q9Y581 213 aa13.57□□□□□ -0.24
PMS1-221ENST00000624204 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 MPZL1O95297 269 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
PMS1-221ENST00000624204 SNCAP37840 140 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 CHAF1BQ13112 559 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 ELAVL3Q14576 367 aaKnown RBP13.56□□□□□ -0.24
PMS1-221ENST00000624204 ZNF74Q16587 644 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 SPNS3Q6ZMD2 512 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 SLC39A11Q8N1S5 342 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 CNTNAP3Q9BZ76 1288 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 SMOC1Q9H4F8 434 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 COLEC10Q9Y6Z7 277 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 LAMA1P25391 3075 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 NKX2-2O95096 273 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 HKR1P10072 659 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 TMEM33P57088 247 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 DHCR24Q15392 516 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 ZNF239Q16600 458 aaKnown RBP13.56□□□□□ -0.24
PMS1-221ENST00000624204 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 ZNF343Q6P1L6 599 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 P4HA3Q7Z4N8 544 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 HSD17B11Q8NBQ5 300 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 OR14K1Q8NGZ2 314 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 BSCL2Q96G97 398 aaPredicted RBP13.56□□□□□ -0.24
PMS1-221ENST00000624204 MESP1Q9BRJ9 268 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 CNTD2Q9H8S5 307 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 FAM212BQ9NTI7 297 aaPredicted RBP13.56□□□□□ -0.24
PMS1-221ENST00000624204 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
PMS1-221ENST00000624204 PPP1R2P9O14990 202 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 SOX15O60248 233 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 CTSVO60911 334 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 SFT2D2O95562 160 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 CD37P11049 281 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 FABP4P15090 132 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 RHEBQ15382 184 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 HNRNPA1L2Q32P51 320 aaKnown RBP13.55□□□□□ -0.24
PMS1-221ENST00000624204 SLC18B1Q6NT16 456 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 FBXO42Q6P3S6 717 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 DBX2Q6ZNG2 339 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 HOGA1Q86XE5 327 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 OR5D18Q8NGL1 313 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 TMEM230Q96A57 120 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 THOC3Q96J01 351 aaKnown RBP13.55□□□□□ -0.24
PMS1-221ENST00000624204 TCEAL2Q9H3H9 227 aaPredicted RBP13.55□□□□□ -0.24
PMS1-221ENST00000624204 ELL3Q9HB65 397 aaPredicted RBP13.55□□□□□ -0.24
PMS1-221ENST00000624204 HHLA2Q9UM44 414 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 HIF3AQ9Y2N7 669 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 LOC107986453A0A1B0GWG9 222 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 TAAR5O14804 337 aa13.55□□□□□ -0.24
PMS1-221ENST00000624204 SLC16A7O60669 478 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms