RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ICMTO60725 284 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 GPX5O75715 221 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 SERPINA3P01011 423 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 IGLV3-1P01715 115 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 TTRP02766 147 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 GALP22466 123 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 GADD45AP24522 165 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 PCSK6P29122 969 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF83P51522 516 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 TMBIM6P55061 237 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 UCP2P55851 309 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 RPS25P62851 125 aaKnown RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 SNAI3Q3KNW1 292 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 ACSM3Q53FZ2 586 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 ALKBH2Q6NS38 261 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 CD200R1LQ6Q8B3 271 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 SEZ6L2Q6UXD5 910 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM91Q6ZNR0 172 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 MYPOPQ86VE0 399 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 CLVS1Q8IUQ0 354 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 PAQR4Q8N4S7 273 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 OR8B12Q8NGG6 310 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 LINC01560Q8TB33 94 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 PHYHIPQ92561 330 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 APOBEC3DQ96AK3 386 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 DGCR14Q96DF8 476 aaKnown RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 MED18Q9BUE0 208 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 TMED9Q9BVK6 235 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 COMMD4Q9H0A8 199 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 OR51E2Q9H255 320 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 CDH20Q9HBT6 801 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 NGBQ9NPG2 151 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 NPAP1Q9NZP6 1156 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 STUB1Q9UNE7 303 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 GTF2A1LQ9UNN4 478 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 CACNA1CQ13936 2221 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 NCOA6Q14686 2063 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-209ENST00000620393 ARHGAP21Q5T5U3 1957 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 PCNX1Q96RV3 2341 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 IGHV2OR16-5A0A0B4J2B6 119 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TRBV5-5A0A0J9YX44 114 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 DPRXA6NFQ7 191 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TUBAL3A6NHL2 446 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 J3QW42 95 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 P2RY10O00398 339 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TBX1O43435 398 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 SYT7O43581 403 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 AIREO43918 545 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 SC5DO75845 299 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 GATBO75879 557 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ATE1O95260 518 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 NGFP01138 241 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CRYAAP02489 173 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 UBCP0CG48 685 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 EPXP11678 715 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ACHEP22303 614 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CCL1P22362 96 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TUBG1P23258 451 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ANOS1P23352 680 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 PTAFRP25105 342 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CD40P25942 277 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 PEX19P40855 299 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 WNT5AP41221 380 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 RAD52P43351 418 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 FABP5Q01469 135 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 NAAAQ02083 359 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CTF1Q16619 201 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ODF4Q2M2E3 257 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TIMM50Q3ZCQ8 353 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 PAMR1Q6UXH9 720 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 UNQ6126/PRO20091Q6UXV3 157 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 Q6ZSR3 168 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CEACAM19Q7Z692 300 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 C1orf174Q8IYL3 243 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 PLPP7Q8NBV4 271 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CCDC54Q8NEL0 328 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 OR5L1Q8NGL2 311 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 OR10AC1Q8NH08 325 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF420Q8TAQ5 688 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 OR51E1Q8TCB6 317 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 GPR148Q8TDV2 347 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 RGP1Q92546 391 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ITFG2Q969R8 447 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 SPSB4Q96A44 273 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ZC3HAV1LQ96H79 300 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 DACH2Q96NX9 599 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 BCL7BQ9BQE9 202 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 NAA50Q9GZZ1 169 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 RBM38Q9H0Z9 239 aaKnown RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 RGCCQ9H4X1 137 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 GPR84Q9NQS5 396 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 TUBG2Q9NRH3 451 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ENPP5Q9UJA9 477 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF391Q9UJN7 358 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 HHLA2Q9UM44 414 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 SSR3Q9UNL2 185 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms