RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 RNF167Q9H6Y7 350 aa13.14□□□□□ -0.31
CBWD1-225ENST00000616944 NPAP1Q9NZP6 1156 aa13.14□□□□□ -0.31
CBWD1-225ENST00000616944 SSR3Q9UNL2 185 aa13.14□□□□□ -0.31
CBWD1-225ENST00000616944 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 FAM90A27PA6NNH2 459 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ATE1O95260 518 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 CECR9P0C854 216 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 AGAP20933 346 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 WNT5AP41221 380 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 VBP1P61758 197 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
CBWD1-225ENST00000616944 TFF3Q07654 80 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 PPA1Q15181 289 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 Q499Y3 187 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ZMAT1Q5H9K5 638 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 TMEM244Q5VVB8 128 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 Q6ZSR3 168 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 PLPP7Q8NBV4 271 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 LYZL4Q96KX0 146 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 IGHV1-18A0A0C4DH31 117 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 P2RY10O00398 339 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 SLC22A1O15245 554 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 GATBO75879 557 aaKnown RBP13.13□□□□□ -0.31
CBWD1-225ENST00000616944 SERPINA3P01011 423 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 MAGEB1P43366 347 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 SPCS2Q15005 226 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 FAM27D1Q5T7N8 215 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 C22orf42Q6IC83 251 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 ITLN2Q8WWU7 325 aaPredicted RBP13.13□□□□□ -0.31
CBWD1-225ENST00000616944 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
CBWD1-225ENST00000616944 MUCL1Q96DR8 90 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 SOX7Q9BT81 388 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 EXOSC4Q9NPD3 245 aaKnown RBP13.13□□□□□ -0.31
CBWD1-225ENST00000616944 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
CBWD1-225ENST00000616944 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
CBWD1-225ENST00000616944 LCATP04180 440 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 THBDP07204 575 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 UCHL1P09936 223 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 OCM2P0CE71 109 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 ZNF35P13682 527 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 SSX8Q7RTT4 187 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 SPSB4Q96A44 273 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 APOBEC3DQ96AK3 386 aaPredicted RBP13.12□□□□□ -0.31
CBWD1-225ENST00000616944 SGK3Q96BR1 496 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 OR10A2Q9H208 303 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 SP140LQ9H930 580 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
CBWD1-225ENST00000616944 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
CBWD1-225ENST00000616944 TRBV5-7A0A0A0MS05 114 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 SHISA3A0PJX4 238 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 PYCARD-AS1I3L0S3 204 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 J3QW42 95 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 PIN1P1O15428 100 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 ZG16O60844 167 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 NGFP01138 241 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 PPP3CBP16298 524 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 CCNOP22674 350 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 GRNP28799 593 aaKnown RBP13.11□□□□□ -0.31
CBWD1-225ENST00000616944 PCSK6P29122 969 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 SORDQ00796 357 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 XKRXQ6PP77 449 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 CEACAM19Q7Z692 300 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 OR1J2Q8NGS2 313 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 TMEM106AQ96A25 262 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 KCNJ16Q9NPI9 418 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
CBWD1-225ENST00000616944 IGHV2OR16-5A0A0B4J2B6 119 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 H3BSH0 61 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 TBX1O43435 398 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 SYT7O43581 403 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 SMPD2O60906 423 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 MAPK3P27361 379 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-225ENST00000616944 ASPHD2Q6ICH7 369 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 DOK3Q7L591 496 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-225ENST00000616944 OR2AE1Q8NHA4 323 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 THRSPQ92748 146 aa13.1□□□□□ -0.31
CBWD1-225ENST00000616944 KCTD7Q96MP8 289 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms