RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NANOGP1Q8N7R0 232 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 TMEM105Q8N8V8 129 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 BHLHE23Q8NDY6 225 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 CD300LFQ8TDQ1 290 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 ANGPTL4Q9BY76 406 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 CES1P1Q9UKY3 287 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 RNF150Q9ULK6 438 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 TMEM200CA6NKL6 621 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 PLPP3O14495 311 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 DFFBO76075 338 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 ZNF121P58317 390 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 BPIFB3P59826 476 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 SNTB1Q13884 538 aaKnown RBP8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GPR157Q5UAW9 335 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 FUNDC1Q8IVP5 155 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 SFTPA1Q8IWL2 248 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 FAM234AQ9H0X4 552 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 OR51E2Q9H255 320 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 MED29Q9NX70 200 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 OR6C3Q9NZP0 311 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 LUZP4Q9P127 313 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 HOXB3P14651 431 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GABRA6Q16445 453 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 ETFRF1Q6IPR1 90 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 MAVSQ7Z434 540 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 FAM58AQ8N1B3 248 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 RHOXF1Q8NHV9 184 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 POC1BQ8TC44 478 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GRAMD2BQ96HH9 432 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GUCD1Q96NT3 240 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 SLC25A21Q9BQT8 299 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 PLCXD1Q9NUJ7 323 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 C1RLQ9NZP8 487 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 TPT1P13693 172 aaKnown RBP8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 HAAOP46952 286 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GAB4Q2WGN9 574 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 ASB10Q8WXI3 467 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 RHNO1Q9BSD3 238 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 GPATCH2Q9NW75 528 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 TAS2R4Q9NYW5 299 aa8.73□□□□□ -1.01
TNFRSF9-204ENST00000615230 FITM1A5D6W6 292 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ZAR1LA6NP61 321 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 WNT1P04628 370 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 GLYATL3Q5SZD4 288 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 PRAMEF5Q5TYX0 476 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 PRAMEF6Q5VXH4 476 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 TMEM65Q6PI78 240 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 RPEQ96AT9 228 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ADTRPQ96IZ2 230 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ATXN7O15265 892 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 NME2P1O60361 137 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 FCMRO60667 390 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 HBE1P02100 147 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 EDN3P14138 238 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 RPS2P15880 293 aaKnown RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 NME2P22392 152 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 FPR2P25090 351 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 FXNQ16595 210 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 PCK2Q16822 640 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 KDM8Q8N371 416 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 MCHR2Q969V1 340 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 HYLS1Q96M11 299 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 GP6Q9HCN6 339 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 FAM60AQ9NP50 221 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 HSPB6O14558 160 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 SLC37A1P57057 533 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 LRRC37A5PQ49AS3 106 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 FBXW9Q5XUX1 488 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 TRILQ7L0X0 811 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 RIMKLAQ8IXN7 391 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 SHISA5Q8N114 240 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 OTOSQ8NHW6 89 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ARSGQ96EG1 525 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 LRRC3BQ96PB8 259 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 RALGAPA2Q2PPJ7 1873 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 HSD17B6O14756 317 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 LILRB5O75023 590 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 GNB1P62873 340 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 EMX1Q04741 257 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 COL9A2Q14055 689 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 OR1S2Q8NGQ3 325 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ZNF721Q8TF20 911 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 PTPMT1Q8WUK0 201 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 ALKBH3Q96Q83 286 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 NIPSNAP1Q9BPW8 284 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 NDUFB11Q9NX14 153 aa8.72□□□□□ -1.01
TNFRSF9-204ENST00000615230 MYO16Q9Y6X6 1858 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 TMEM82A0PJX8 343 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 HMX2A2RU54 273 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 CYR61O00622 381 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 ERGP11308 486 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 ZNF85Q03923 595 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 LIPNQ5VXI9 398 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms