RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PPP1R3EQ9H7J1 279 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 EXTL2Q9UBQ6 330 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 STEAP1Q9UHE8 339 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 TUBD1Q9UJT1 453 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 FIGNL2A6NMB9 653 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 COX5BP10606 129 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 CD79AP11912 226 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 ZNF20P17024 532 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 TALDO1P37837 337 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 CLDN12P56749 244 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 TGFBR3Q03167 851 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 HGFACQ04756 655 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 SNAI3Q3KNW1 292 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 Q6ZT83 130 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 SEM1Q6ZVN7 128 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 GDPD1Q8N9F7 314 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 CCDC54Q8NEL0 328 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 OR14K1Q8NGZ2 314 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 LGALS14Q8TCE9 139 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 GTF3C1Q12789 2109 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 BOD1L1Q8NFC6 3051 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 A6NIN4 97 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 C1QTNF9BB2RNN3 333 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 LCATP04180 440 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 C1QTNF9P0C862 333 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 PER3P56645 1201 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 RAB1AP62820 205 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 RGS21Q2M5E4 152 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 RTL6Q6ICC9 239 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 TMEM53Q6P2H8 277 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 Q6ZSR3 168 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 LYSMD2Q8IV50 215 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 OR51A2Q8NGJ7 313 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 SGK3Q96BR1 496 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 OCEL1Q9H607 264 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 PLSCR4Q9NRQ2 329 aa18.81■□□□□ 0.6
USP6NL-204ENST00000606752 IGF2RP11717 2491 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 ISPDA4D126 451 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 ZNF503-AS2A6NEH8 195 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 SLC17A2O00624 439 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 UBL3O95164 117 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 IGHV1-2P23083 117 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 SCAND1P57086 179 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 SPOCK1Q08629 439 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 FOXF2Q12947 444 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 IL18Q14116 193 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 ZNF529Q6P280 563 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 VWA1Q6PCB0 445 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 CD163Q86VB7 1156 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 NKAIN3Q8N8D7 197 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 FAM57AQ8TBR7 257 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 OR5V1Q9UGF6 321 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 ARHGAP21Q5T5U3 1957 aa18.8■□□□□ 0.6
USP6NL-204ENST00000606752 MTRF1O75570 445 aaKnown RBP18.79■□□□□ 0.6
USP6NL-204ENST00000606752 DHRS3O75911 302 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 AZGP1P25311 298 aaKnown RBP18.79■□□□□ 0.6
USP6NL-204ENST00000606752 RIN1Q13671 783 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 HIKESHIQ53FT3 197 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 PYDC2Q56P42 97 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 UBE2NLQ5JXB2 153 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 C1orf185Q5T7R7 199 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 STEAP3Q658P3 488 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 PGAP1Q75T13 922 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 OR8H2Q8N162 312 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 OR1M1Q8NGA1 313 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 OR4M1Q8NGD0 313 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 NANOS1Q8WY41 292 aaKnown RBP18.79■□□□□ 0.6
USP6NL-204ENST00000606752 TMEM138Q9NPI0 162 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 FAM215AQ9Y5M1 114 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 ETV7Q9Y603 341 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 V9GYS6 101 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 CRHP06850 196 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 HOXD4P09016 255 aaPredicted RBP18.79■□□□□ 0.6
USP6NL-204ENST00000606752 RAB3AP20336 220 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 BDKRB2P30411 391 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 TDGF1P3P51864 188 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 PLP2Q04941 152 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 TBRG1Q3YBR2 411 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 FAM166AQ6J272 317 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 FOXRED1Q96CU9 486 aaPredicted RBP18.79■□□□□ 0.6
USP6NL-204ENST00000606752 PLEKHA1Q9HB21 404 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 NOX3Q9HBY0 568 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 C14orf119Q9NWQ9 140 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 B3GNT2Q9NY97 397 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 ZNF391Q9UJN7 358 aa18.79■□□□□ 0.6
USP6NL-204ENST00000606752 LOC390937A0A1W2PQ73 354 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 TNFSF13O75888 250 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 MADCAM1Q13477 382 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 P2RY14Q15391 338 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 RAB11BQ15907 218 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 EIF2S3LQ2VIR3 472 aaKnown RBP18.78■□□□□ 0.6
USP6NL-204ENST00000606752 DOCK7Q96N67 2140 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 C1QTNF5Q9BXJ0 243 aa18.78■□□□□ 0.6
USP6NL-204ENST00000606752 MAP1BP46821 2468 aaKnown RBP18.77■□□□□ 0.6
USP6NL-204ENST00000606752 LOC100509620A0A075B734 347 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 TOXO94900 526 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 STOMP27105 288 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 BAK1Q16611 211 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 CCDC36Q8IYA8 594 aa18.77■□□□□ 0.6
USP6NL-204ENST00000606752 C10orf35Q96D05 121 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms