RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RABGGTBP53611 331 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FOXA1P55317 472 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 WNT4P56705 351 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 H2BFSP57053 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BDP58876 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BCP62807 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FABP5Q01469 135 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PAX5Q02548 391 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST2H2BEQ16778 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NKPD1Q17RQ9 610 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 UNC50Q53HI1 259 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR2T2Q6IF00 324 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PAQR6Q6TCH4 344 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NUFIP2Q7Z417 695 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ADIPOR2Q86V24 386 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 XYLT1Q86Y38 959 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SLC30A8Q8IWU4 369 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 YAF2Q8IY57 180 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 APCDD1Q8J025 514 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 LRRC52Q8N7C0 313 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR4S1Q8NGB4 309 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 OR9G4Q8NGQ1 327 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BHQ93079 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PEBP4Q96S96 227 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 FEVQ99581 238 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BNQ99877 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 HIST1H2BMQ99879 126 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 SULT4A1Q9BR01 284 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RIOK2Q9BVS4 552 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RAB11FIP5Q9BXF6 653 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 WWTR1Q9GZV5 400 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 IKZF5Q9H5V7 419 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TPT1P8Q9HAU6 139 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NECAP2Q9NVZ3 263 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 PLEKHJ1Q9NW61 149 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 ALKBH4Q9NXW9 302 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 TAS2R5Q9NYW4 299 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 NEU3Q9UQ49 428 aa4.23□□□□□ -1.73
LINC01109-201ENST00000603837 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
LINC01109-201ENST00000603837 RLFQ13129 1914 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 LCTP09848 1927 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ANKRD30BLA7E2S9 258 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 F6UZH7 168 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 AGPAT2O15120 278 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR2F2O95006 317 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 AMY2AP04746 511 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 IL5P05113 134 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 UCHL1P09936 223 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 HKR1P10072 659 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 AMY2BP19961 511 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 FGF9P31371 208 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TFPI2P48307 235 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TNFSF10P50591 281 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 MVDP53602 400 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TAS2R39P59534 338 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ARF6P62330 175 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ABHD18Q0P651 414 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR2F1Q13607 317 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 KLF9Q13886 244 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 WDR25Q64LD2 544 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SLC35E3Q7Z769 313 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM135Q86UB9 458 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 GABRG1Q8N1C3 465 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ACBD7Q8N6N7 88 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 NEIL3Q8TAT5 605 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 PROKR1Q8TCW9 393 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SH3RF2Q8TEC5 729 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 THEM6Q8WUY1 208 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 RNF141Q8WVD5 230 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 NTNG2Q96CW9 530 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 CMBLQ96DG6 245 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ZFP3Q96NJ6 502 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 EPYCQ99645 322 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 FSD1LQ9BXM9 530 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TPSD1Q9BZJ3 242 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR2J1Q9GZK6 312 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SYT4Q9H2B2 425 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 UBE2ZQ9H832 354 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D17Q9HA65 648 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF701Q9NV72 531 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 GPATCH2LQ9NWQ4 482 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SLC25A13Q9UJS0 675 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 NEUROG3Q9Y4Z2 214 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SNX11Q9Y5W9 270 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 FLVCR1Q9Y5Y0 555 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SSC5DA1L4H1 1573 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 PAPPA2Q9BXP8 1791 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 hCG_38984A0A1B0GV85 526 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TRDV1A0A1B0GX56 115 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 PRR33A8MZF0 331 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ENTPD6O75354 484 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 GCGP01275 180 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SERPIND1P05546 499 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TDGF1P13385 188 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 AMD1P17707 334 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 GABRA5P31644 462 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms