RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PAX7P23759 505 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 MAGEB1P43366 347 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 UQCRFS1P47985 274 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC6A9P48067 706 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 ASCL1P50553 236 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 FAM27D1Q5T7N8 215 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 OR51E1Q8TCB6 317 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 DYNC2LI1Q8TCX1 351 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 LYZL4Q96KX0 146 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 KCNS3Q9BQ31 491 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 USB1Q9BQ65 265 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 MED18Q9BUE0 208 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 DCSTAMPQ9H295 470 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 C5orf49A4QMS7 147 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 B8ZZF3 427 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 RAF1P04049 648 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 MAPK3P27361 379 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 APLNRP35414 380 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SERPINB10P48595 397 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 MTNR1BP49286 362 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 TAB1Q15750 504 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SNAI3Q3KNW1 292 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 C3orf36Q3SXR2 165 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SEZ6L2Q6UXD5 910 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 PAQR4Q8N4S7 273 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 OR52H1Q8NGJ2 320 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 LILRB4Q8NHJ6 448 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 THRSPQ92748 146 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 DACH2Q96NX9 599 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 SOX7Q9BT81 388 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 ACTR6Q9GZN1 396 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 MOV10Q9HCE1 1003 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 GPR84Q9NQS5 396 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 PTTG2Q9NZH5 202 aa12.77□□□□□ -0.37
SHKBP1-211ENST00000595945 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 TRAV1-2A0A0B4J238 106 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 A0A1B0GVI7 797 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 LOC390937A0A1W2PQ73 354 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 TBX1O43435 398 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 ARL6IP5O75915 188 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 C1QL1O75973 258 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 IL1AP01583 271 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 LCATP04180 440 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 PRB1P04280 392 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 OCM2P0CE71 109 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 CCL2P13500 99 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF182P17025 639 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 WNT5AP41221 380 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 SOX2P48431 317 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 IDH3GP51553 393 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 MTFR2Q6P444 385 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 DOK3Q7L591 496 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 DCUN1D5Q9BTE7 237 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF275Q9NSD4 429 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 COQ3Q9NZJ6 369 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 ERRFI1Q9UJM3 462 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF391Q9UJN7 358 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 N6AMT1Q9Y5N5 214 aa12.76□□□□□ -0.37
SHKBP1-211ENST00000595945 H3BSH0 61 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 J3QW42 95 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 SYT7O43581 403 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 LMX1BO60663 402 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 CDRT1O95170 752 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 CLEC2LP0C7M8 214 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 CECR9P0C854 216 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF35P13682 527 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 CALRP27797 417 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 SDC2P34741 201 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 PPA1Q15181 289 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 HSD17B12Q53GQ0 312 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 DOPEY1Q5JWR5 2465 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 GLYATL3Q5SZD4 288 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 ASPHD2Q6ICH7 369 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 TPRA1Q86W33 373 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF843Q8N446 348 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 OR14K1Q8NGZ2 314 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 TSEN15Q8WW01 171 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 TMEM106AQ96A25 262 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 APOBEC3DQ96AK3 386 aaPredicted RBP12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 RGCCQ9H4X1 137 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 CCDC59Q9P031 241 aaKnown RBP12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 V9GYS6 101 aa12.75□□□□□ -0.37
SHKBP1-211ENST00000595945 ROS1P08922 2347 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms