RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NAXEQ8NCW5 288 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 CPEB3Q8NE35 698 aaKnown RBP9.94□□□□□ -0.82
SMAD4-205ENST00000588745 CCDC54Q8NEL0 328 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 C1orf162Q8NEQ5 155 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-205ENST00000588745 OR1J2Q8NGS2 313 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 TRMT10AQ8TBZ6 339 aaKnown RBP9.94□□□□□ -0.82
SMAD4-205ENST00000588745 STARD4Q96DR4 205 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 FAM71F1Q96KD3 344 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-205ENST00000588745 SOX7Q9BT81 388 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 OR10A2Q9H208 303 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 PLSCR4Q9NRQ2 329 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 ASF1BQ9NVP2 202 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 ADAM30Q9UKF2 790 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 V9GYH0 126 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 SVILO95425 2214 aa9.94□□□□□ -0.82
SMAD4-205ENST00000588745 RAD51DO75771 328 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 LYZL6O75951 148 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 LCATP04180 440 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF20P17024 532 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 CFPP27918 469 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 CEACAM8P31997 349 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-205ENST00000588745 PSMD7P51665 324 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 PPP5CP53041 499 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 GSG1Q2KHT4 349 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 SNAI3Q3KNW1 292 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 HES5Q5TA89 166 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 C16orf87Q6PH81 154 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 Q6ZSR3 168 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 CCDC36Q8IYA8 594 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 GABRG1Q8N1C3 465 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 DNAAF1Q8NEP3 725 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 OR14K1Q8NGZ2 314 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 FGGYQ96C11 551 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 ADAT3Q96EY9 351 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-205ENST00000588745 DIRAS2Q96HU8 199 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 BOD1Q96IK1 185 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 LYZL4Q96KX0 146 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 SFXN3Q9BWM7 321 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 OPN3Q9H1Y3 402 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-205ENST00000588745 PLEKHA1Q9HB21 404 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 CHD8Q9HCK8 2581 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 B3GNT2Q9NY97 397 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF835Q9Y2P0 537 aa9.93□□□□□ -0.82
SMAD4-205ENST00000588745 LOC100509620A0A075B734 347 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 A0A0B4J203 849 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 CIB4A0PJX0 185 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 DHRS3O75911 302 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 PAHP00439 452 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 GLI4P10075 376 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 SNRPBP14678 240 aaKnown RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 STOMP27105 288 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 GNALP38405 381 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 DDOSTP39656 456 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 UBE2NP61088 152 aaKnown RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 PLP2Q04941 152 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 GABRA6Q16445 453 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF529Q6P280 563 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 C3P1Q6ZMU1 363 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 MDP1Q86V88 176 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 LRRC28Q86X40 367 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 DOLPP1Q86YN1 238 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF584Q8IVC4 421 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 SERPINA12Q8IW75 414 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 NKAIN3Q8N8D7 197 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 SAMD12Q8N8I0 201 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 OR1M1Q8NGA1 313 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 OR51A2Q8NGJ7 313 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF671Q8TAW3 534 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 LGALS14Q8TCE9 139 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 SGK3Q96BR1 496 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 MRI1Q9BV20 369 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 C1QTNF5Q9BXJ0 243 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 RGCCQ9H4X1 137 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF391Q9UJN7 358 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 V9GYS6 101 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 TLN1Q9Y490 2541 aaKnown RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 PRRC2CQ9Y520 2896 aaKnown RBP9.92□□□□□ -0.82
SMAD4-205ENST00000588745 PIEZO2Q9H5I5 2752 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 BOD1L1Q8NFC6 3051 aa9.92□□□□□ -0.82
SMAD4-205ENST00000588745 LOC390937A0A1W2PQ73 354 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 C5orf49A4QMS7 147 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 XRCC2O43543 280 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 MTRF1O75570 445 aaKnown RBP9.91□□□□□ -0.82
SMAD4-205ENST00000588745 EDN3P14138 238 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 HOXB1P14653 301 aaPredicted RBP9.91□□□□□ -0.82
SMAD4-205ENST00000588745 RAB3AP20336 220 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 HOXC12P31275 282 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 THBS4P35443 961 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 RBPJQ06330 500 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 SPOCK1Q08629 439 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 P2RY6Q15077 328 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 GLYATL3Q5SZD4 288 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 GLT8D1Q68CQ7 371 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 CNIH2Q6PI25 160 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 COLCA1Q6ZS62 124 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 BEND4Q6ZU67 534 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 PGAP1Q75T13 922 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 C17orf78Q8N4C9 275 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms