RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CNOT2Q9NZN8 540 aaKnown RBP16.41■□□□□ 0.22
DDX39A-204ENST00000586558 TAAR3PQ9P1P4 343 aa16.41■□□□□ 0.22
DDX39A-204ENST00000586558 MYEF2Q9P2K5 600 aaKnown RBP16.41■□□□□ 0.22
DDX39A-204ENST00000586558 ZNF391Q9UJN7 358 aa16.41■□□□□ 0.22
DDX39A-204ENST00000586558 CCDC168Q8NDH2 2452 aa16.41■□□□□ 0.22
DDX39A-204ENST00000586558 TMEM269A0A1B0GVZ9 245 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 ERCC1P07992 297 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-204ENST00000586558 TACSTD2P09758 323 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 LIPAP38571 399 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 CDKN1AP38936 164 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 GALEQ14376 348 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 GK2Q14410 553 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-204ENST00000586558 CDONQ4KMG0 1287 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 ZMAT1Q5H9K5 638 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 LAIR2Q6ISS4 152 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 MRPL21Q7Z2W9 205 aaKnown RBP16.4■□□□□ 0.22
DDX39A-204ENST00000586558 YIPF7Q8N8F6 280 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 SPSB4Q96A44 273 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 PGAM5Q96HS1 289 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 BARX1Q9HBU1 254 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-204ENST00000586558 FAM206AQ9NX38 181 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 PURGQ9UJV8 347 aaKnown RBP16.4■□□□□ 0.22
DDX39A-204ENST00000586558 MYRFQ9Y2G1 1151 aa16.4■□□□□ 0.22
DDX39A-204ENST00000586558 PLSCR5A0PG75 271 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 TBX1O43435 398 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 TIMM8AO60220 97 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-204ENST00000586558 PTH2RP49190 550 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 HLXQ14774 488 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-204ENST00000586558 TIGD6Q17RP2 521 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 C6orf141Q5SZD1 244 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 GLYATL3Q5SZD4 288 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 PGAP1Q75T13 922 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 ITFG2Q969R8 447 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 FOXC2Q99958 501 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 REPIN1Q9BWE0 567 aaKnown RBP16.39■□□□□ 0.21
DDX39A-204ENST00000586558 BRD7Q9NPI1 651 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 ERVK13-1Q9NX77 482 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 NUFIP1Q9UHK0 495 aaKnown RBP16.39■□□□□ 0.21
DDX39A-204ENST00000586558 DIMT1Q9UNQ2 313 aaKnown RBP16.39■□□□□ 0.21
DDX39A-204ENST00000586558 N6AMT1Q9Y5N5 214 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 R4GMQ9 66 aa16.39■□□□□ 0.21
DDX39A-204ENST00000586558 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 A0A0U1RQV5 110 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 LOC110117498-PIK3R3F6TDL0 507 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 MAGEB4O15481 346 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-204ENST00000586558 FAM20BO75063 409 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 SRSF10O75494 262 aaKnown RBP16.38■□□□□ 0.21
DDX39A-204ENST00000586558 ADRA2AP08913 450 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 ALDH3B1P43353 468 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 MMP15P51511 669 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 ATP5J2P56134 94 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 ZNF92Q03936 586 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 MED21Q13503 144 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 LIPNQ5VXI9 398 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 SYS1Q8N2H4 156 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 BPIFB6Q8NFQ5 453 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 OR2AE1Q8NHA4 323 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 VRK1Q99986 396 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-204ENST00000586558 RAB1BQ9H0U4 201 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 PSORS1C1Q9UIG5 152 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 GNG8Q9UK08 70 aa16.38■□□□□ 0.21
DDX39A-204ENST00000586558 EXOSC1Q9Y3B2 195 aaKnown RBP16.38■□□□□ 0.21
DDX39A-204ENST00000586558 C5orf63A6NC05 138 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 IQCF6A8MYZ5 107 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 XPNPEP2O43895 674 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 MYL12AP19105 171 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 ANOS1P23352 680 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 PCGF3Q3KNV8 242 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 TMEM255AQ5JRV8 349 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 OR2T2Q6IF00 324 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 LHFPL3Q86UP9 236 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 OR8B12Q8NGG6 310 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 HAVCR2Q8TDQ0 301 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 GGHQ92820 318 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 PERPQ96FX8 193 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 TMEM80Q96HE8 168 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 REEP6Q96HR9 211 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 DIRC2Q96SL1 478 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 ALG8Q9BVK2 526 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 ACOXLQ9NUZ1 547 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 SCN3BQ9NY72 215 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 NKIRAS2Q9NYR9 191 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
DDX39A-204ENST00000586558 C17orf100A8MU93 164 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 SLC1A7O00341 560 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 ADH4P08319 380 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 CCDC159P0C7I6 412 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 LIMS3P0CW19 117 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 LIMS4P0CW20 117 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 DDOSTP39656 456 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 ZNF81P51508 661 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 EFNA4P52798 201 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 MFGE8Q08431 387 aaPredicted RBP16.36■□□□□ 0.21
DDX39A-204ENST00000586558 ST3GAL4Q11206 333 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 MRPL28Q13084 256 aaKnown RBP16.36■□□□□ 0.21
DDX39A-204ENST00000586558 ALKBH6Q3KRA9 238 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 TP53I3Q53FA7 332 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 BCL2L15Q5TBC7 163 aa16.36■□□□□ 0.21
DDX39A-204ENST00000586558 OR8G5Q8NG78 346 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms