RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 LCATP04180 440 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 DBHP09172 617 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 OCM2P0CE71 109 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 GNLYP22749 145 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 MALLQ13021 153 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 SOWAHCQ53LP3 525 aaPredicted RBP13.25□□□□□ -0.29
SS18-206ENST00000577572 PRR7Q8TB68 274 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 RGP1Q92546 391 aaPredicted RBP13.25□□□□□ -0.29
SS18-206ENST00000577572 RPL3LQ92901 407 aaKnown RBP13.25□□□□□ -0.29
SS18-206ENST00000577572 CENPOQ9BU64 300 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 CDH20Q9HBT6 801 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 SLC24A3Q9HC58 644 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 KCNJ16Q9NPI9 418 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 DHDHQ9UQ10 334 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 CACNA1CQ13936 2221 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 IGSF10Q6WRI0 2623 aa13.25□□□□□ -0.29
SS18-206ENST00000577572 A0A1B0GTI1 187 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 EPXP11678 715 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 MYL9P24844 172 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 RANBP1P43487 201 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 IDH3GP51553 393 aaPredicted RBP13.24□□□□□ -0.29
SS18-206ENST00000577572 PSMD7P51665 324 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 TSC22D1Q15714 1073 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 TAB1Q15750 504 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 ZBTB37Q5TC79 503 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 C22orf42Q6IC83 251 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 SEZ6L2Q6UXD5 910 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 NCCRP1Q6ZVX7 275 aaPredicted RBP13.24□□□□□ -0.29
SS18-206ENST00000577572 CROCCP3Q8IVE0 287 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 SLC7A6Q92536 515 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 DERL3Q96Q80 235 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 KCNS3Q9BQ31 491 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 SLITRK2Q9H156 845 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 BRD7Q9NPI1 651 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 ZNF275Q9NSD4 429 aaPredicted RBP13.24□□□□□ -0.29
SS18-206ENST00000577572 CKLFQ9UBR5 152 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 FOXJ3Q9UPW0 622 aa13.24□□□□□ -0.29
SS18-206ENST00000577572 DHRS3O75911 302 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 ALX3O95076 343 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 ZNF35P13682 527 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 FSTP19883 344 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 CCKARP32238 428 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 DDOSTP39656 456 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 RAD52P43351 418 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 VBP1P61758 197 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 NCS1P62166 190 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 TSEN15Q8WW01 171 aaKnown RBP13.23□□□□□ -0.29
SS18-206ENST00000577572 TMEM106AQ96A25 262 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
SS18-206ENST00000577572 DACH2Q96NX9 599 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 OR14A2Q96R54 314 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 BCL2L14Q9BZR8 327 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 DCSTAMPQ9H295 470 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 SNTG1Q9NSN8 517 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 ZNF319Q9P2F9 582 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 NDRG3Q9UGV2 375 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 SPEF1Q9Y4P9 236 aa13.23□□□□□ -0.29
SS18-206ENST00000577572 NBEAQ8NFP9 2946 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 P2RY10O00398 339 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 PDCD5O14737 125 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 TBX1O43435 398 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 ATE1O95260 518 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 CECR9P0C854 216 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 SLC2A1P11166 492 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 PTAFRP25105 342 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 HGFACQ04756 655 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 IGFBP7Q16270 282 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 SNAI3Q3KNW1 292 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 PP6455Q8WZ26 134 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 PPP1R14AQ96A00 147 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 CCDC59Q9P031 241 aaKnown RBP13.22□□□□□ -0.29
SS18-206ENST00000577572 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 V9GYS6 101 aa13.22□□□□□ -0.29
SS18-206ENST00000577572 ANKRD61A6NGH8 418 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 CLDN14O95500 239 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 CRYAAP02489 173 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 SRMP19623 302 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 CCNOP22674 350 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 NR4A1P22736 598 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.29
SS18-206ENST00000577572 SOX6P35712 828 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 MAP2K3P46734 347 aa13.21□□□□□ -0.29
SS18-206ENST00000577572 SERPINB10P48595 397 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms