RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SF3B1O75533 1304 aaKnown RBP eCLIP2.55□□□□□ -2
SMCHD1-202ENST00000577300 ZMPSTE24O75844 475 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 CTDNEP1O95476 244 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 H6PDO95479 791 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 CST4P01036 141 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ZNF806P0C7X5 589 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TPSB2P20231 275 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TBXA2RP21731 343 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 BGNP21810 368 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 FCARP24071 287 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ATP5A1P25705 553 aaKnown RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 FMO3P31513 532 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OTX1P32242 354 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 AQP2P41181 271 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 MAGEA3P43357 314 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 GABRA4P48169 554 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RGS6P49758 472 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 IDH3GP51553 393 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 UGT2B15P54855 530 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RPL26P61254 145 aaKnown RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 COPZ1P61923 177 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OGDHQ02218 1023 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 APOFQ13790 326 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 PDE7AQ13946 482 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 DPYSL3Q14195 570 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 KCNJ11Q14654 390 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TPSAB1Q15661 275 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 FAM135BQ49AJ0 1406 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 Q5BKY6 102 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 PABPC1L2AQ5JQF8 200 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 C9orf64Q5T6V5 341 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 SYT6Q5T7P8 510 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 TTC23Q5W5X9 447 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 DLEU7Q6UYE1 221 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 CENPUQ71F23 418 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TMEM135Q86UB9 458 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ANGPTL5Q86XS5 388 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 CALHM1Q8IU99 346 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 FUNDC1Q8IVP5 155 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 WDFY1Q8IWB7 410 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RDH10Q8IZV5 341 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RNF148Q8N7C7 305 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ARIH2OSQ8N7S6 290 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OR1M1Q8NGA1 313 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OR5D13Q8NGL4 314 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OR11L1Q8NGX0 322 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 OR4K15Q8NH41 348 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TM4SF19Q96DZ7 209 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 PPP3R2Q96LZ3 170 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 AMDHD1Q96NU7 426 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 SMIM14Q96QK8 99 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 SERPINI1Q99574 410 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 KLF6Q99612 283 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 NRTNQ99748 197 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TCEAL7Q9BRU2 100 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 TMEM208Q9BTX3 173 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 MND1Q9BWT6 205 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 SIRPDQ9H106 197 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 MIXL1Q9H2W2 232 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 GLIPR2Q9H4G4 154 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 KIR3DX1Q9H7L2 352 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 AKIRIN1Q9H9L7 192 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 NMNAT1Q9HAN9 279 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 APMAPQ9HDC9 416 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 FGFR1OP2Q9NVK5 253 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 BFARQ9NZS9 450 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 DHCR7Q9UBM7 475 aaKnown RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 PRPF19Q9UMS4 504 aaKnown RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 GSTK1Q9Y2Q3 226 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 KCNIP3Q9Y2W7 256 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 PRG3Q9Y2Y8 225 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 VIRMAQ69YN4 1812 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 NEURL4Q96JN8 1562 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SCAF11Q99590 1463 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 PNPLA6Q8IY17 1366 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 MED23Q9ULK4 1368 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 MROH7-TTC4A0A0A0MT08 1334 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 MBLAC1A4D2B0 266 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 DISC1C4P0D8 188 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SGK494L7N484 410 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CXCR6O00574 342 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 IMPA2O14732 288 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PSTPIP1O43586 416 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PLIN3O60664 434 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 RP2O75695 350 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 OR2J2O76002 312 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TM7SF2O76062 418 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TOXO94900 526 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SCELO95171 688 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TDP2O95551 362 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TTC4O95801 387 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CCNE2O96020 404 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TIMP1P01033 207 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 IGF2P01344 180 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 IFNA21P01568 189 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 IFNA5P01569 189 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 FGGP02679 453 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SERPINE2P07093 398 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CRYGBP07316 175 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms