RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CRMP1Q14194 572 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 MOGAT3Q86VF5 341 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 C1orf87Q8N0U7 546 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 LNX2Q8N448 690 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR51L1Q8NGJ5 315 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF420Q8TAQ5 688 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 SPRYD4Q8WW59 207 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 ASB9Q96DX5 294 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 DMRTB1Q96MA1 342 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 SLC6A7Q99884 636 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 COPS4Q9BT78 406 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 DDX28Q9NUL7 540 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 VNN3Q9NY84 501 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR5V1Q9UGF6 321 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 OPN4Q9UHM6 478 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 NOP16Q9Y3C1 178 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 A0A1B0GWJ7 208 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 RIIAD1A6NNX1 92 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 A8MXK9 166 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 F5H0A9 414 aaPredicted RBP10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 HLA-DPB1P04440 258 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 RAP2AP10114 183 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 IRF2P14316 349 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF3P17036 446 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 FMO3P31513 532 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 ENTPD1P49961 510 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 MS4A2Q01362 244 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 TAF13Q15543 124 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 MICAQ29983 383 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF181Q2M3W8 571 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 ARMCX4Q5H9R4 360 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 DRAM2Q6UX65 266 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 DCXRQ7Z4W1 244 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 DEFB108BQ8NET1 73 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR10G2Q8NGC3 310 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR10S1Q8NGN2 331 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR6K6Q8NGW6 343 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR4Q3Q8NH05 313 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 TEX47Q8TBZ9 253 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 EDARADDQ8WWZ3 215 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 DDOQ99489 341 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 MRI1Q9BV20 369 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 RBM4Q9BWF3 364 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 DGCR6LQ9BY27 220 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
CTDNEP1-205ENST00000570828 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF205O95201 554 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 FSHBP01225 129 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 GYPBP06028 91 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF12P17014 697 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 SPI1P17947 270 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 CPT2P23786 658 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 FPR2P25090 351 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 GATA4P43694 442 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 BLVRAP53004 296 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 SLC25A1P53007 311 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF154Q13106 437 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 GK3PQ14409 553 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR8G1Q15617 311 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 NLRC3Q7RTR2 1065 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 NAA40Q86UY6 237 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 OR11L1Q8NGX0 322 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNRF4Q8WWF5 429 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 ADAT1Q9BUB4 502 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 SSBP3Q9BWW4 388 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 SLC22A4Q9H015 551 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 CENPMQ9NSP4 180 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 MIOXQ9UGB7 285 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 AUP1Q9Y679 476 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 TANC2Q9HCD6 1990 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 NBEAL1Q6ZS30 2694 aa10.37□□□□□ -0.75
CTDNEP1-205ENST00000570828 GGT3PA6NGU5 568 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 A6NJY4 79 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 CD300LBA8K4G0 201 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF878C9JN71 531 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 H3BN98 237 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 TRAPPC2LH3BP13 241 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF593O00488 134 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 CST1P01037 141 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 PSKH1P11801 424 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 CA6P23280 308 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 CD200P41217 278 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 PRKXP51817 358 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZNF404Q494X3 552 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 BTNL3Q6UXE8 466 aa10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-205ENST00000570828 KLBQ86Z14 1044 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms