RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 OR10AD1Q8NGE0 317 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 OR51L1Q8NGJ5 315 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 OR9Q1Q8NGQ5 310 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 TFAP2CQ92754 450 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 MAP6Q96JE9 813 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 RBM4BQ9BQ04 359 aaKnown RBP12.18□□□□□ -0.46
CMTM3-215ENST00000568477 SLC30A2Q9BRI3 323 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
CMTM3-215ENST00000568477 GABARAPL1Q9H0R8 117 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 WDR76Q9H967 626 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 PNRC2Q9NPJ4 139 aaKnown RBP12.18□□□□□ -0.46
CMTM3-215ENST00000568477 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 SMPD3Q9NY59 655 aaPredicted RBP12.18□□□□□ -0.46
CMTM3-215ENST00000568477 PCDHB10Q9UN67 800 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 FBN3Q75N90 2809 aa12.18□□□□□ -0.46
CMTM3-215ENST00000568477 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 H0YAE9 185 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 M0R135 149 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 E2F6O75461 281 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 IFNGP01579 166 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 ALPLP05186 524 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 GATA3P23771 443 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 MMP16P51512 607 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 BTG1P62324 171 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 LCN2P80188 198 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 TMEM155Q4W5P6 130 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
CMTM3-215ENST00000568477 KLHL36Q8N4N3 616 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 MEGF10Q96KG7 1140 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 TMPRSS13Q9BYE2 586 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 ANKRD60Q9BZ19 345 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 COMMD3-BMI1R4GMX3 469 aa12.17□□□□□ -0.46
CMTM3-215ENST00000568477 LOC105371242A0A075B767 164 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 TMEM178BH3BS89 294 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 FOXH1O75593 365 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 LYNP07948 512 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 SPARCP09486 303 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 ZNF3P17036 446 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 SPI1P17947 270 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 FMO3P31513 532 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 SLC6A9P48067 706 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 SLC25A1P53007 311 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 PRSS12P56730 875 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 BLMHQ13867 455 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 GK2Q14410 553 aaPredicted RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 LYPD4Q6UWN0 246 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 CD300LDQ6UXZ3 194 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 DCXRQ7Z4W1 244 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 LRRC28Q86X40 367 aaPredicted RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 OR10S1Q8NGN2 331 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 TEX47Q8TBZ9 253 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 ZNRF4Q8WWF5 429 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 SIGLEC11Q96RL6 698 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 ADI1Q9BV57 179 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 NMNAT2Q9BZQ4 307 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 DDX28Q9NUL7 540 aaKnown RBP12.16□□□□□ -0.46
CMTM3-215ENST00000568477 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
CMTM3-215ENST00000568477 A0A0A6YYJ9 748 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 ARRDC5A6NEK1 342 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 F5H5P2 479 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 H0YL77 283 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 MLNRO43193 412 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 AVPP01185 164 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 GYPBP06028 91 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 EPHA1P21709 976 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 MYF6P23409 242 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 RBMXP38159 391 aaKnown RBP12.15□□□□□ -0.46
CMTM3-215ENST00000568477 CAPGP40121 348 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 ENTPD1P49961 510 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 BLVRAP53004 296 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 TAF13Q15543 124 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-215ENST00000568477 PGAP1Q75T13 922 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 NAA40Q86UY6 237 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 MUC20Q8N307 709 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-215ENST00000568477 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 OR6K6Q8NGW6 343 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 ZNF418Q8TF45 676 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-215ENST00000568477 SPRYD4Q8WW59 207 aaPredicted RBP12.15□□□□□ -0.46
CMTM3-215ENST00000568477 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 FEVQ99581 238 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 NIPSNAP1Q9BPW8 284 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 COPS4Q9BT78 406 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 C7orf69Q9H7B7 122 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms