RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4Q9UBX2 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
SMG1-213ENST00000567737 CAPN7Q9Y6W3 813 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 TRAPPC13A5PLN9 417 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 OR6C6A6NF89 314 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 A6NLC8 198 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 M0R1W7 72 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 EREGO14944 169 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 ITM2AO43736 263 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 SYNGR1O43759 233 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 SLC22A3O75751 556 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 OR7A10O76100 309 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 LYPD3O95274 346 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 SHBGP04278 402 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 RPL27P61353 136 aaKnown RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 IKZF1Q13422 519 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 AQP6Q13520 282 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 NPTX1Q15818 432 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 ADAMTSL5Q6ZMM2 481 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 TCP10LQ8TDR4 215 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 SPRYD4Q8WW59 207 aaPredicted RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 ZNF426Q9BUY5 554 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 SLC22A4Q9H015 551 aa11.11□□□□□ -0.63
SMG1-213ENST00000567737 MEPEQ9NQ76 525 aaPredicted RBP11.11□□□□□ -0.63
SMG1-213ENST00000567737 MT-ND1P03886 318 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 BPGMP07738 259 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 CHATP28329 748 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 AQP1P29972 269 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 GSK3BP49841 420 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 RPL14P50914 215 aaKnown RBP11.1□□□□□ -0.63
SMG1-213ENST00000567737 MICBQ29980 383 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 ALG10Q5BKT4 473 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 LRRC10Q5BKY1 277 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 WDR38Q5JTN6 314 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 MSANTD1Q6ZTZ1 278 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
SMG1-213ENST00000567737 FAM216BQ8N7L0 139 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 SMYD1Q8NB12 490 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 EPS8L3Q8TE67 593 aaKnown RBP11.1□□□□□ -0.63
SMG1-213ENST00000567737 MYDGFQ969H8 173 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 SGTBQ96EQ0 304 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 ADAT1Q9BUB4 502 aaKnown RBP11.1□□□□□ -0.63
SMG1-213ENST00000567737 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 TCF19Q9Y242 345 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 RAP2CQ9Y3L5 183 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 PCLOQ9Y6V0 5065 aa11.1□□□□□ -0.63
SMG1-213ENST00000567737 A0A1W2PQ09 198 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 POLR3GO15318 223 aaPredicted RBP11.09□□□□□ -0.63
SMG1-213ENST00000567737 SPAG7O75391 227 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
SMG1-213ENST00000567737 GHRHP01286 108 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 GRPP07492 148 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 MUC1P15941 1255 aaPredicted RBP11.09□□□□□ -0.63
SMG1-213ENST00000567737 CA6P23280 308 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 SCARB2Q14108 478 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
SMG1-213ENST00000567737 ZNF826PQ6ZT77 177 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
SMG1-213ENST00000567737 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 OR5D13Q8NGL4 314 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 PITPNC1Q9UKF7 332 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 HERC2O95714 4834 aa11.09□□□□□ -0.63
SMG1-213ENST00000567737 A6NIZ1 184 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 GMDSO60547 372 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 LHBP01229 141 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 TSPAN19P0C672 248 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 FAM153BP0C7A2 387 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
SMG1-213ENST00000567737 RAP1BP61224 184 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 RAP1AP62834 184 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 ELF3P78545 371 aaPredicted RBP11.08□□□□□ -0.64
SMG1-213ENST00000567737 GK2Q14410 553 aaPredicted RBP11.08□□□□□ -0.64
SMG1-213ENST00000567737 HCP5Q6MZN7 132 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
SMG1-213ENST00000567737 Q6ZS46 218 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 PGAP1Q75T13 922 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 TMEM219Q86XT9 240 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 KIRREL3Q8IZU9 778 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 PFN4Q8NHR9 129 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 ABCB10Q9NRK6 738 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 HIF3AQ9Y2N7 669 aa11.08□□□□□ -0.64
SMG1-213ENST00000567737 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
SMG1-213ENST00000567737 H0YAE9 185 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms