RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SNAPC1Q16533 368 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 RSPO1Q2MKA7 263 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TEX30Q5JUR7 227 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 C12orf73Q69YU5 71 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 DCXRQ7Z4W1 244 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 CPOQ8IVL8 374 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 CBR4Q8N4T8 237 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF420Q8TAQ5 688 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF582Q96NG8 517 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 C9orf16Q9BUW7 83 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PRRG3Q9BZD7 231 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 OR51V1Q9H2C8 321 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 METTL17Q9H7H0 456 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 MARCH7Q9H992 704 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PNRC2Q9NPJ4 139 aaKnown RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TUBG2Q9NRH3 451 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 CENPMQ9NSP4 180 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 NPTNQ9Y639 398 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 CUBNO60494 3623 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 M0R135 149 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 PLPP2O43688 288 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 RGS9O75916 674 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF205O95201 554 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 BAG2O95816 211 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 HLA-DPB1P04440 258 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 LCN2P80188 198 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 MALLQ13021 153 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 TAF13Q15543 124 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF283Q8N7M2 679 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 OR10S1Q8NGN2 331 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 ST7LQ8TDW4 575 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF799Q96GE5 643 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 COPS4Q9BT78 406 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 PCDHB10Q9UN67 800 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
VPS9D1-204ENST00000565023 TRAV20A0A0B4J274 112 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 C5orf63A6NC05 138 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 E9PQ18 207 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 F5H5P2 479 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF593O00488 134 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 PRKYO43930 277 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SLC2A1P11166 492 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ANPEPP15144 967 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SELEP16581 610 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SLC2A5P22732 501 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 GSTT1P30711 240 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ENTPD1P49961 510 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 RAD23AP54725 363 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ECH1Q13011 328 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 GK2Q14410 553 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 KRTAP27-1Q3LI81 207 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SLC35D3Q5M8T2 416 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 MRPL21Q7Z2W9 205 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 TIGD4Q8IY51 512 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 BBS1Q8NFJ9 593 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 OR6N2Q8NGY6 317 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 OR2AE1Q8NHA4 323 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SPTSSAQ969W0 71 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 SLC29A1Q99808 456 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 C1QTNF5Q9BXJ0 243 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 RIBC2Q9H4K1 309 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 IL19Q9UHD0 177 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 ANK2Q01484 3957 aa11.5□□□□□ -0.57
VPS9D1-204ENST00000565023 LOC105371242A0A075B767 164 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 J3QW42 95 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 MLNRO43193 412 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 PNPP00491 289 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 ANOS1P23352 680 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 RCN1Q15293 331 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 KRTAP24-1Q3LI83 254 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 AADACL4Q5VUY2 407 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 ZBTB49Q6ZSB9 765 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 PGAP1Q75T13 922 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 MOGAT3Q86VF5 341 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 TCEANCQ8N8B7 351 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 TMEM163Q8TC26 289 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 SPRYD4Q8WW59 207 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 DVL3Q92997 716 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 EME1Q96AY2 570 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 ZMYND19Q96E35 227 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 INTS14Q96SY0 518 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms