RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OR2T1O43869 369 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 DDAH2O95865 285 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 IGHMP01871 453 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 KCNJ3P48549 501 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 EBPQ15125 230 aaKnown RBP12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 GFOD2Q3B7J2 385 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 GRINAQ7Z429 371 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 COMMD2Q86X83 199 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 BHLHE23Q8NDY6 225 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 OR10H5Q8NGA6 315 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 RXFP4Q8TDU9 374 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 GLYATL2Q8WU03 294 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 CTSFQ9UBX1 484 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 ATXN7L1Q9ULK2 861 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 TRANK1O15050 2925 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 PCNX3Q9H6A9 2034 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 A6NIZ1 184 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 MPIG6BO95866 241 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 TTRP02766 147 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 FAM157CP0CG43 387 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF93P35789 620 aaPredicted RBP12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 GFERP55789 205 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 RAP1BP61224 184 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 RAP1AP62834 184 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 QRFPP83859 136 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 RHOFQ9HBH0 211 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 PDE7BQ9NP56 450 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 MED29Q9NX70 200 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 OR5AC2Q9NZP5 309 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 LPAR3Q9UBY5 353 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 IGKV1D-43A0A0B4J1Z2 117 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 A0A1W2PQD3 144 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 TSPAN2O60636 221 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 ABOP16442 354 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF20P17024 532 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 CAPZBP47756 277 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 MMP16P51512 607 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 DCAF7P61962 342 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 AKIRIN2Q53H80 203 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 DEGS2Q6QHC5 323 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 GSKIPQ9P0R6 139 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 LRP4O75096 1905 aa12.43□□□□□ -0.42
VPS9D1-202ENST00000561976 IGHV5-51A0A0C4DH38 117 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 IGHV4-34P06331 123 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 ABCD3P28288 659 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 MST1LQ2TV78 715 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 PRSS54Q6PEW0 395 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 ASB10Q8WXI3 467 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 SLAMF6Q96DU3 332 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 RAB3CQ96E17 227 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 ZC3H10Q96K80 434 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 NRIP2Q9BQI9 281 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 MMACHCQ9Y4U1 282 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 SEC16AO15027 2179 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 AGPAT2O15120 278 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF217O75362 1048 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 SFT2D2O95562 160 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 GABRG2P18507 467 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 MEOX2P50222 304 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 S100A10P60903 97 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 GLIPR1L1Q6UWM5 242 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 FOXRED2Q8IWF2 684 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 RNF133Q8WVZ7 376 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 C5orf34Q96MH7 638 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 BANF2Q9H503 90 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 FAM206AQ9NX38 181 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 DHCR7Q9UBM7 475 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
VPS9D1-202ENST00000561976 PQLC2LA1A4F0 135 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MS4A18H0YCH9 400 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MBTPS2O43462 519 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 GABRA4P48169 554 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 DAP3P51398 398 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 CLDN6P56747 220 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 ELAVL1Q15717 326 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 NSDHLQ15738 373 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 SWI5Q1ZZU3 235 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MS4A18Q3C1V0 323 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 DRAM2Q6UX65 266 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 SLC29A4Q7RTT9 530 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 WDFY1Q8IWB7 410 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM230Q96A57 120 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 LRRC61Q9BV99 259 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 WWTR1Q9GZV5 400 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MTIF3Q9H2K0 278 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 RAB18Q9NP72 206 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 CUTCQ9NTM9 273 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 GPR132Q9UNW8 380 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MRPS28Q9Y2Q9 187 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms