RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 IGKV1D-16P01601 117 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 MYL2P10916 166 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 LGALS3P17931 250 aaKnown RBP1.93□□□□□ -2.1
PSMA4-221ENST00000560842 RAB4AP20338 218 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 NTF3P20783 257 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 HTR1DP28221 377 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 ATP5OP48047 213 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 RPS11P62280 158 aaKnown RBP eCLIP1.93□□□□□ -2.1
PSMA4-221ENST00000560842 RBX1P62877 108 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 LIPEQ05469 1076 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 ART3Q13508 389 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF235Q14590 738 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 RBMY1FQ15415 496 aaKnown RBP1.93□□□□□ -2.1
PSMA4-221ENST00000560842 HSP90AB3PQ58FF7 597 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 SPIN3Q5JUX0 258 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 CDH26Q8IXH8 852 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 OR5M1Q8NGP8 315 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 OR1J4Q8NGS1 313 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 C8orf44Q96CB5 159 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 ECHDC3Q96DC8 303 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 TMEM243Q9BU79 118 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 ANGPTL4Q9BY76 406 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 SLIRPQ9GZT3 109 aaKnown RBP1.93□□□□□ -2.1
PSMA4-221ENST00000560842 TOLLIPQ9H0E2 274 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 TMEM38AQ9H6F2 299 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 AP3B1O00203 1094 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 NMT2O60551 498 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 WBP4O75554 376 aaKnown RBP1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CIB2O75838 187 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CD160O95971 181 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 KRT14P02533 472 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CTRB1P17538 263 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 BCKDHBP21953 392 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 USF1P22415 310 aaPredicted RBP1.92□□□□□ -2.1
PSMA4-221ENST00000560842 PBLDP30039 288 aaPredicted RBP1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CD70P32970 193 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 PFN2P35080 140 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 BMI1P35226 326 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 TGFBR1P36897 503 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 TALDO1P37837 337 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 IDH2P48735 452 aaKnown RBP1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CCNG1P51959 295 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 UBE2E1P51965 193 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 SLC25A35Q3KQZ1 300 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 GCSAMLQ5JQS6 135 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 PRAMEF20Q5VT98 475 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 SPESP1Q6UW49 350 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 C19orf18Q8NEA5 215 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 OR9G4Q8NGQ1 327 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 OR1L1Q8NH94 360 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 OR51E1Q8TCB6 317 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 HAUS1Q96CS2 278 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 ZFP3Q96NJ6 502 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 XPO6Q96QU8 1125 aaKnown RBP1.92□□□□□ -2.1
PSMA4-221ENST00000560842 PLIN2Q99541 437 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 RHOXF2Q9BQY4 288 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 C20orf24Q9BUV8 137 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 ZYG11BQ9C0D3 744 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 RETNQ9HD89 108 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 CLN6Q9NWW5 311 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 COMMD3-BMI1R4GMX3 469 aa1.92□□□□□ -2.1
PSMA4-221ENST00000560842 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 TRIP11Q15643 1979 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 OR2AG2A6NM03 316 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 HBE1P02100 147 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 MT-ND4P03905 459 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 ASGR1P07306 291 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 PGA5P0DJD9 388 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 CSNK2A2P19784 350 aaPredicted RBP1.91□□□□□ -2.1
PSMA4-221ENST00000560842 MPV17P39210 176 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 TNFSF9P41273 254 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 CYP24A1Q07973 514 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF266Q14584 549 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 CARD17Q5XLA6 110 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 PRSS54Q6PEW0 395 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 TMEM136Q6ZRR5 245 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF664Q8N3J9 261 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 GPR26Q8NDV2 337 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 TMEM104Q8NE00 496 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 OR10W1Q8NGF6 305 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 CCDC77Q9BR77 488 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 ACTR3CQ9C0K3 210 aaPredicted RBP1.91□□□□□ -2.1
PSMA4-221ENST00000560842 LINC00574Q9H8X3 128 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF391Q9UJN7 358 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 SIGLEC1Q9BZZ2 1709 aa1.91□□□□□ -2.1
PSMA4-221ENST00000560842 A0A1W2PNN7 141 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.9□□□□□ -2.11
PSMA4-221ENST00000560842 M0R3G1 203 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 RAD1O60671 282 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 SERPINB7O75635 380 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 SNX4O95219 450 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 LSM8O95777 96 aaKnown RBP1.9□□□□□ -2.11
PSMA4-221ENST00000560842 PGA4P0DJD7 388 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 PGA3P0DJD8 388 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 ALKBH6Q3KRA9 238 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 C12orf54Q6X4T0 127 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 RTL4Q6ZR62 310 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 NT5DC3Q86UY8 548 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms