RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CORO2AQ92828 525 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 PUS1Q9Y606 427 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 HOXC4P09017 264 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 ARRB2P32121 409 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SRP9P49458 86 aaKnown RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SPATA46Q5T0L3 261 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SMRP1Q8NCR6 262 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 NAA50Q9GZZ1 169 aaKnown RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 GDF2Q9UK05 429 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 OR2A25A4D2G3 310 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 DRD3P35462 400 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 FAM109AQ8N4B1 249 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 OR6K3Q8NGY3 331 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 GPBAR1Q8TDU6 330 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 MBOAT4Q96T53 435 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 DHHO43323 396 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 NCCRP1Q6ZVX7 275 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM99Q8N816 258 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 OR2AE1Q8NHA4 323 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 POFUT1Q9H488 388 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 COPS3Q9UNS2 423 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 A0A087WUJ7 227 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 CRYBA1P05813 215 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 TNFRSF1AP19438 455 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 PRSS36Q5K4E3 855 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF321PQ8N8H1 164 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 LY75O60449 1722 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 PRSS45Q7RTY3 260 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 CARFQ8N187 725 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SLC38A9Q8NBW4 561 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 K7EQS6 105 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SULT1C4O75897 302 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 RPS27P42677 84 aaKnown RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 BTLAQ7Z6A9 289 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF75AQ96N20 296 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SPRY3O43610 288 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 RAB1AP62820 205 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SYT6Q5T7P8 510 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 R4GMQ9 66 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 FAM90A27PA6NNH2 459 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 COL9A1P20849 921 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 OPRM1P35372 400 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 THNSL2Q86YJ6 484 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 CMTM4Q8IZR5 234 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 MRPS24Q96EL2 167 aaKnown RBP12.17□□□□□ -0.46
TRAF3-208ENST00000560371 FSCN3Q9NQT6 498 aa12.17□□□□□ -0.46
TRAF3-208ENST00000560371 TRABD2BA6NFA1 517 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 FJX1Q86VR8 437 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 APOBEC4Q8WW27 367 aaKnown RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 GLI4P10075 376 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 ELFN2Q5R3F8 820 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 OR2Z1Q8NG97 314 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 PBOV1Q9GZY1 135 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 QSER1Q2KHR3 1735 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 CTSVO60911 334 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 PMS2P2O95744 297 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 ALOX5APP20292 161 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 MEOX1P50221 254 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 NXPH1P58417 271 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 HSPB2Q16082 182 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 TAF9Q16594 264 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 GSG1Q2KHT4 349 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 OR13F1Q8NGS4 319 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 SMIM19Q96E16 107 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 ZAR1LA6NP61 321 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 TCRBP04435 133 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF83P51522 516 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 MC2RQ01718 297 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 TESK1Q15569 626 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 FCRL1Q96LA6 429 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 RANGRFQ9HD47 186 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.468e-8■■■■■ 31.6
TRAF3-208ENST00000560371 IGLV3-16A0A075B6K0 115 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 LRRC10Q5BKY1 277 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 SARGQ9BW04 601 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 PRDM7Q9NQW5 492 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 CHST2Q9Y4C5 530 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 SLC36A1Q7Z2H8 476 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 UBAC2Q8NBM4 344 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-208ENST00000560371 SPNS1Q9H2V7 528 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms