RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 NANOS1Q8WY41 292 aaKnown RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 SLC7A6Q92536 515 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 BOD1Q96IK1 185 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 DHRS9Q9BPW9 319 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 MOB1AQ9H8S9 216 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 NOX3Q9HBY0 568 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 B3GNT2Q9NY97 397 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 ZNF629Q9UEG4 869 aaPredicted RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 N6AMT1Q9Y5N5 214 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 SVILO95425 2214 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 GTF3C1Q12789 2109 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 DOCK7Q96N67 2140 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ACOD1A6NK06 481 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 M0R135 149 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 GATBO75879 557 aaKnown RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 ISG15P05161 165 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ANXA2P07355 339 aaKnown RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 SLC2A1P11166 492 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 NAT1P18440 290 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 CA7P43166 264 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 TSC22D1Q15714 1073 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 KRTAP27-1Q3LI81 207 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ZMAT1Q5H9K5 638 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 TMEM211Q6ICI0 200 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 PAMR1Q6UXH9 720 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 UNQ9370/PRO34162Q6UXP9 181 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 PRSS45Q7RTY3 260 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 NAA40Q86UY6 237 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 CXorf67Q86X51 503 aaPredicted RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 LIX1LQ8IVB5 337 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ELMOD2Q8IZ81 293 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 GPR148Q8TDV2 347 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 ZNF799Q96GE5 643 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 OR14A2Q96R54 314 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 DMRTA2Q96SC8 542 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 PIGMQ9H3S5 423 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 NUFIP1Q9UHK0 495 aaKnown RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 ATPIF1Q9UII2 106 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 MEMO1Q9Y316 297 aa9.78□□□□□ -0.84
USP3-218ENST00000560202 MAP1BP46821 2468 aaKnown RBP9.78□□□□□ -0.84
USP3-218ENST00000560202 TRBV5-5A0A0J9YX44 114 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 HMX3A6NHT5 357 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 ZNF879B4DU55 563 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 MSTNO14793 375 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 TTRP02766 147 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 UBCP0CG48 685 aaKnown RBP9.77□□□□□ -0.84
USP3-218ENST00000560202 COX5BP10606 129 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.84
USP3-218ENST00000560202 BMP5P22003 454 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 SLC6A9P48067 706 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 P2RX3P56373 397 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 UBE2NP61088 152 aaKnown RBP9.77□□□□□ -0.84
USP3-218ENST00000560202 GSG1Q2KHT4 349 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 Q499Y3 187 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 ATAD3CQ5T2N8 411 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 SFRP5Q5T4F7 317 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 FAM27D1Q5T7N8 215 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 TMEM244Q5VVB8 128 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 DRAM2Q6UX65 266 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 FAM57BQ71RH2 274 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 LUZP2Q86TE4 346 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 OR10AC1Q8NH08 325 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 RND1Q92730 232 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 PPIL3Q9H2H8 161 aaKnown RBP9.77□□□□□ -0.84
USP3-218ENST00000560202 ZNF319Q9P2F9 582 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 OSGIN2Q9Y236 505 aa9.77□□□□□ -0.84
USP3-218ENST00000560202 FREM1Q5H8C1 2179 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ATRXP46100 2492 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ARPC4-TTLL3A0A0A6YYG9 625 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 LOC107986453A0A1B0GWG9 222 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 A0A1W2PPK0 400 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 A8MXE2 369 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 B8ZZF3 427 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 H3BSH0 61 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 P2RY10O00398 339 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 TBX1O43435 398 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ARL6IP5O75915 188 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 CDRT1O95170 752 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 UCHL1P09936 223 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ACSM4P0C7M7 580 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ACHEP22303 614 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 APEX1P27695 318 aaKnown RBP9.77□□□□□ -0.85
USP3-218ENST00000560202 RPS19P39019 145 aaKnown RBP9.77□□□□□ -0.85
USP3-218ENST00000560202 MAGEB1P43366 347 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 SOX2P48431 317 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 PLP2Q04941 152 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 MDP1Q86V88 176 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 C17orf78Q8N4C9 275 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 OR8B12Q8NGG6 310 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 PHYHIPQ92561 330 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 PGAM5Q96HS1 289 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 MED18Q9BUE0 208 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 HHLA2Q9UM44 414 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 PRELID1Q9Y255 219 aa9.77□□□□□ -0.85
USP3-218ENST00000560202 ARHGAP21Q5T5U3 1957 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms