RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CX3CR1P49238 355 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 DAPP51397 102 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 PRKXP51817 358 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CDC42P60953 191 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 DBPQ10586 325 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 CDK5R2Q13319 367 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 PTGES3Q15185 160 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 TRIP10Q15642 601 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 KCNJ8Q15842 424 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TIGD6Q17RP2 521 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 RSPO1Q2MKA7 263 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 SNAI3Q3KNW1 292 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 KRTAP27-1Q3LI81 207 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 LINC01590Q5TEZ4 76 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TMEM236Q5W0B7 351 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 KDM4DQ6B0I6 523 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 FAHD2BQ6P2I3 314 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 FAHD1Q6P587 224 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 LYPD4Q6UWN0 246 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SPATC1Q76KD6 591 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CXXC5Q7LFL8 322 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 KRT77Q7Z794 578 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 AMIGO2Q86SJ2 522 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 NAA40Q86UY6 237 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 GLCCI1Q86VQ1 547 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 KLBQ86Z14 1044 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CPOQ8IVL8 374 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 GID4Q8IVV7 300 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TIGD4Q8IY51 512 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 MUC20Q8N307 709 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 SPICQ8N5J4 248 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CELF2-AS1Q8N7Q2 184 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SPERTQ8NA61 448 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 PLPP7Q8NBV4 271 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OR10AD1Q8NGE0 317 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OR11L1Q8NGX0 322 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OR51F2Q8NH61 342 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CLDND2Q8NHS1 167 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OTOSQ8NHW6 89 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ST7LQ8TDW4 575 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 RNF133Q8WVZ7 376 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ZNRF4Q8WWF5 429 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 PYDC1Q8WXC3 89 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ASB17Q8WXJ9 295 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 LRTOMTQ8WZ04 291 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 STMN2Q93045 179 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 YIPF5Q969M3 257 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ERGIC1Q969X5 290 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 UTP4Q969X6 686 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 TMEM186Q96B77 213 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ZMYND19Q96E35 227 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 FAHD2AQ96GK7 314 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OR2V2Q96R30 315 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 CNN2Q99439 309 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 MNTQ99583 582 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SLC30A2Q9BRI3 323 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ABHD6Q9BV23 337 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 YIPF3Q9GZM5 350 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OR10A2Q9H208 303 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SEMA6AQ9H2E6 1030 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 RGCCQ9H4X1 137 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ZNF665Q9H7R5 613 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 NIPAL2Q9H841 368 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 MED20Q9H944 212 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 NTN4Q9HB63 628 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SLC25A19Q9HC21 320 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TMEM106BQ9NUM4 274 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 HIF1ANQ9NWT6 349 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 UBAP1Q9NZ09 502 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TREM2Q9NZC2 230 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 MRPL15Q9P015 296 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 TMEFF2Q9UIK5 374 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 ZNF391Q9UJN7 358 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OAZ3Q9UMX2 235 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 WIPI2Q9Y4P8 454 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 NPTNQ9Y639 398 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SONP18583 2426 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 NF1P21359 2839 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TRAV20A0A0B4J274 112 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 A0A0G2JMP0 313 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 A0A0X1KG70 313 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TMEM269A0A1B0GVZ9 245 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ANXA2P2A6NMY6 339 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZAR1LA6NP61 321 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CD300LBA8K4G0 201 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 F5H5P2 479 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 PHYHO14832 338 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 PRKYO43930 277 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 SELENOFO60613 162 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZNF254O75437 659 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MTRF1O75570 445 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 FOXH1O75593 365 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 HLA-DPB1P04440 258 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 SBK2P0C263 348 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 SLC2A1P11166 492 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ALOX5APP20292 161 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CA6P23280 308 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 GATA3P23771 443 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CPT2P23786 658 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 IL2RGP31785 369 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms