RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 BOLLQ8N9W6 283 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 C19orf18Q8NEA5 215 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 THEM6Q8WUY1 208 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 SPRYD4Q8WW59 207 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 LRTOMTQ8WZ04 291 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 RAB1CQ92928 201 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 POP5Q969H6 163 aaKnown RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 RASSF4Q9H2L5 321 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 ZNF665Q9H7R5 613 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 CMC2Q9NRP2 79 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 UFSP2Q9NUQ7 469 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 NKIRAS2Q9NYR9 191 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 TMEFF2Q9UIK5 374 aaPredicted RBP10.16□□□□□ -0.78
TPM1-216ENST00000558910 CDC42EP3Q9UKI2 254 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 ZDHHC8Q9ULC8 765 aa10.16□□□□□ -0.78
TPM1-216ENST00000558910 GGT3PA6NGU5 568 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 SAC3D1A6NKF1 404 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 ANXA8P13928 327 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 HNF1AP20823 631 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 HSD11B1P28845 292 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 LIPAP38571 399 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 DAPP51397 102 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 SLC25A1P53007 311 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 LMO4P61968 165 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 LCN2P80188 198 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
TPM1-216ENST00000558910 ECH1Q13011 328 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 GK2Q14410 553 aaPredicted RBP10.15□□□□□ -0.78
TPM1-216ENST00000558910 SNAPC1Q16533 368 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 FAM201AQ5SY85 155 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 GLYATL3Q5SZD4 288 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 PRAMEF6Q5VXH4 476 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 PGAP1Q75T13 922 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
TPM1-216ENST00000558910 PEG10Q86TG7 708 aaKnown RBP10.15□□□□□ -0.78
TPM1-216ENST00000558910 MOGAT3Q86VF5 341 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 GLCCI1Q86VQ1 547 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 C1orf174Q8IYL3 243 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 OR8G5Q8NG78 346 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 WFDC12Q8WWY7 111 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 COG8Q96MW5 612 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 INTS14Q96SY0 518 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 AMELYQ99218 206 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 C1QTNF5Q9BXJ0 243 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 NMNAT2Q9BZQ4 307 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 NTN4Q9HB63 628 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 PAPOLBQ9NRJ5 636 aaKnown RBP10.15□□□□□ -0.78
TPM1-216ENST00000558910 TMEM106BQ9NUM4 274 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 TMEM100Q9NV29 134 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 PCDHB10Q9UN67 800 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 PPP1R3CQ9UQK1 317 aa10.15□□□□□ -0.78
TPM1-216ENST00000558910 DNHD1Q96M86 4753 aa10.15□□□□□ -0.79
TPM1-216ENST00000558910 ATRQ13535 2644 aa10.15□□□□□ -0.79
TPM1-216ENST00000558910 FBN1P35555 2871 aaKnown RBP10.14□□□□□ -0.79
TPM1-216ENST00000558910 B4DSR2 109 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 H3BSA7 217 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 PSMD9O00233 223 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 SURF4O15260 269 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 MLNRO43193 412 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 ICMTO60725 284 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 ATP5HO75947 161 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 GLCEO94923 617 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 IFNA2P01563 188 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 CA6P23280 308 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 CX3CR1P49238 355 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 MRPS11P82912 194 aaKnown RBP10.14□□□□□ -0.79
TPM1-216ENST00000558910 ZNF92Q03936 586 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 APOFQ13790 326 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 LINC01590Q5TEZ4 76 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 SHQ1Q6PI26 577 aaKnown RBP10.14□□□□□ -0.79
TPM1-216ENST00000558910 CD300LDQ6UXZ3 194 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 FBXW12Q6X9E4 464 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 CCDC121Q6ZUS5 278 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 FAM57BQ71RH2 274 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 CXXC5Q7LFL8 322 aaKnown RBP10.14□□□□□ -0.79
TPM1-216ENST00000558910 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 OR5K1Q8NHB7 308 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 MEGF10Q96KG7 1140 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 DIRC2Q96SL1 478 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 SSBP4Q9BWG4 385 aaPredicted RBP10.14□□□□□ -0.79
TPM1-216ENST00000558910 AP4S1Q9Y587 144 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 NPTNQ9Y639 398 aa10.14□□□□□ -0.79
TPM1-216ENST00000558910 RNF212BA8MTL3 300 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 PLPP2O43688 288 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 HMGN1P05114 100 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 MSMBP08118 114 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 H2BFMP0C1H6 154 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 FAM157CP0CG43 387 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 ADRA2CP18825 462 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 TNFRSF1AP19438 455 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 FASP25445 335 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 CRISP1P54107 249 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 RAD23AP54725 363 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 OR8G1Q15617 311 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 PAPD5Q8NDF8 572 aaKnown RBP10.13□□□□□ -0.79
TPM1-216ENST00000558910 DEFB108BQ8NET1 73 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 OR51F2Q8NH61 342 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms