RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	GOLGA8N	F8WBI6	632 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC28A1	O00337	649 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ABCD4	O14678	606 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	AZIN1	O14977	448 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SCAMP2	O15127	329 aa	Known RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	PHF1	O43189	567 aa	Predicted RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	CYTIP	O60759	359 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	PEX11A	O75192	247 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	GLRA3	O75311	464 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	PTBP3	O95758	552 aa	Known RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	NUDT14	O95848	222 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	C6orf47	O95873	294 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TGFA	P01135	160 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	GPI	P06744	558 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	AREG	P15514	252 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	COX5A	P20674	150 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ME2	P23368	584 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ELK4	P28324	431 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ALDH3A1	P30838	453 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCT3	P49368	545 aa	Known RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF83	P51522	516 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	P2RX1	P51575	399 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	HBA1	P69905	142 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	RASGEF1B	Q0VAM2	473 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	FUT5	Q11128	374 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SKP2	Q13309	424 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM249	Q2WGJ8	235 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	VPS26B	Q4G0F5	336 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	XKR7	Q5GH72	579 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC25A53	Q5H9E4	307 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	CFAP157	Q5JU67	520 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	DCST2	Q5T1A1	773 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	PDZK1	Q5T2W1	519 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	C6orf52	Q5T4I8	152 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	RNF165	Q6ZSG1	346 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZCCHC23	Q6ZST2	131 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	MISP	Q8IVT2	679 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	RIMKLA	Q8IXN7	391 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	CLECL1	Q8IZS7	167 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF525	Q8N782	197 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	WDR31	Q8NA23	367 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR5W2	Q8NH69	310 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	AGR3	Q8TD06	166 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM186	Q96B77	213 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRIM44	Q96DX7	344 aa	Predicted RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	DTNBP1	Q96EV8	351 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	CHMP6	Q96FZ7	201 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	ARL5B	Q96KC2	179 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR7D2	Q96RA2	312 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	STAC	Q99469	402 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SDF2	Q99470	211 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	OPRPN	Q99935	248 aa	Predicted RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	RHOXF2	Q9BQY4	288 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	C1orf50	Q9BV19	199 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	POTEKP	Q9BYX7	375 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	TSPYL1	Q9H0U9	437 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	C3orf14	Q9HBI5	128 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	GPR173	Q9NS66	373 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC17A7	Q9P2U7	560 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	STK38L	Q9Y2H1	464 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC25A15	Q9Y619	301 aa		4.27	□□□□□ -1.73
PSMC6-208	ENST00000554956	UQCRHL	A0A096LP55	91 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	CFAP73	A6NFT4	308 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	SERINC4	A6NH21	518 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF724	A8MTY0	619 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	PDLIM1	O00151	329 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TLX2	O43763	284 aa	Predicted RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	SCN2B	O60939	215 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	UGT2B17	O75795	530 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	FGF4	P08620	206 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	PABPC4L	P0CB38	370 aa	Known RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	UBTFL6	P0CB48	400 aa	Predicted RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	HPGD	P15428	266 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	LCN1	P31025	176 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	EIF1	P41567	113 aa	Known RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCR4	P51679	360 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRAP1	Q12931	704 aa	Known RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	SELENBP1	Q13228	472 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF141	Q15928	474 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	GABRA6	Q16445	453 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCDC153	Q494R4	210 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TIMM23B	Q5SRD1	257 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	C9orf135	Q5VTT2	229 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	IL23R	Q5VWK5	629 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMPPE	Q6ZT21	453 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	MTERF4	Q7Z6M4	381 aa	Known RBP	4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF614	Q8N883	585 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR52E4	Q8NGH9	312 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	C10orf105	Q8TEF2	133 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TWIST2	Q8WVJ9	160 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR5P2	Q8WZ92	322 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	RAB8B	Q92930	207 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	FAM46B	Q96A09	425 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	CCDC126	Q96EE4	140 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	SAMD8	Q96LT4	415 aa		4.26	□□□□□ -1.73
PSMC6-208	ENST00000554956	TSSK2	Q96PF2	358 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms