RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 HPSE2Q8WWQ2 592 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 HIST1H2BLQ99880 126 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 TMEM208Q9BTX3 173 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 A0A0C4DFX4 3053 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 B3GALT2O43825 422 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 CTSVO60911 334 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 AKR1C4P17516 323 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 PPM1FP49593 454 aaPredicted RBP14.01□□□□□ -0.17
SYNE3-203ENST00000554873 PDGFRLQ15198 375 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ZNHIT3Q15649 155 aaPredicted RBP14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF684Q5T5D7 378 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 DCXRQ7Z4W1 244 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 PEG10Q86TG7 708 aaKnown RBP14.01□□□□□ -0.17
SYNE3-203ENST00000554873 CDRT4Q8N9R6 151 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 HSD17B11Q8NBQ5 300 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 Q8WTZ3 238 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 MRGPRFQ96AM1 343 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 TM4SF19Q96DZ7 209 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 OR2A5Q96R48 311 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 TBC1D29Q9UFV1 150 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 SLCO1B1Q9Y6L6 691 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 COLEC10Q9Y6Z7 277 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 TRBV23OR9-2A0A075B6M9 112 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF432O94892 652 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 CXCL1P09341 107 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 TACSTD2P09758 323 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 GZMBP10144 247 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 CHATP28329 748 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 MSX1P28360 303 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 EIF2B1Q14232 305 aaKnown RBP14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ELOBQ15370 118 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF584Q8IVC4 421 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 ADAD2Q8NCV1 583 aaKnown RBP14.01□□□□□ -0.17
SYNE3-203ENST00000554873 SMARCD2Q92925 531 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 SLC25A31Q9H0C2 315 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
SYNE3-203ENST00000554873 A0A087WZY1 265 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 TMEM269A0A1B0GVZ9 245 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 PRR32B1ATL7 298 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 M0R143 59 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 FGF17O60258 216 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 STK17BO94768 372 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 RPP30P78346 268 aaKnown RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 ISXQ2M1V0 245 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 FAM220AQ7Z4H9 259 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 BHLHE23Q8NDY6 225 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 TMEM52Q8NDY8 209 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 ROBO4Q8WZ75 1007 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 TMEM106AQ96A25 262 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 TMEM106CQ9BVX2 250 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 FRRS1LQ9P0K9 344 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CHRNA9Q9UGM1 479 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 RAB27BO00194 218 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 SOX15O60248 233 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 DOK2O60496 412 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF354AO60765 605 aaPredicted RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 TRGC2P03986 189 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CT62P0C5K7 136 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CLN3Q13286 438 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 HYAL4Q2M3T9 481 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 PSRC1Q6PGN9 363 aaPredicted RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 SLC22A25Q6T423 547 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 GNRHR2Q96P88 292 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 ACTR3CQ9C0K3 210 aaPredicted RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 CAPN10Q9HC96 672 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 FGF22Q9HCT0 170 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 KLK13Q9UKR3 277 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 MRPS2Q9Y399 296 aaKnown RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 IER3IP1Q9Y5U9 82 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 PUS1Q9Y606 427 aaKnown RBP eCLIP14□□□□□ -0.17
SYNE3-203ENST00000554873 MTCH2Q9Y6C9 303 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CDH23Q9H251 3354 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 SLC17A2O00624 439 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 KAT7O95251 611 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 PET100P0DJ07 73 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 AK4P27144 223 aaPredicted RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 TDGF1P3P51864 188 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 PRSS41Q7RTY9 318 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 OR4S1Q8NGB4 309 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 APOOQ9BUR5 198 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CNTNAP3Q9BZ76 1288 aa14□□□□□ -0.17
SYNE3-203ENST00000554873 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
SYNE3-203ENST00000554873 A0A087WV62 115 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 A0A1W2PQU0 124 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 CRTAPO75718 401 aaPredicted RBP13.99□□□□□ -0.17
SYNE3-203ENST00000554873 METTL15P1P0C7V9 234 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 TRGC1P0CF51 173 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 FCARP24071 287 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 ACAA2P42765 397 aaKnown RBP13.99□□□□□ -0.17
SYNE3-203ENST00000554873 LSSP48449 732 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 EMDP50402 254 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 FAM3AP98173 230 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 MGAT2Q10469 447 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 SAPCD1Q5SSQ6 148 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 OR6K6Q8NGW6 343 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
SYNE3-203ENST00000554873 PBDC1Q9BVG4 233 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 SLC2A4RGQ9NR83 387 aa13.99□□□□□ -0.17
SYNE3-203ENST00000554873 FAM212BQ9NTI7 297 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms