RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 HTR3EA5X5Y0 456 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TTC36A6NLP5 189 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PLOD3O60568 738 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 NME6O75414 186 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 UPK1BO75841 260 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PTTG1O95997 202 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 IGHV3-9P01782 118 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 HMGN1P05114 100 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 HMGN2P05204 90 aaKnown RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 CHRM4P08173 479 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF17P17021 662 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TNFRSF1BP20333 461 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 NT5EP21589 574 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 GADD45AP24522 165 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 FPR3P25089 353 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PSMA1P25786 263 aaKnown RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 S100A5P33763 92 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 CARD18P57730 90 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 LMO4P61968 165 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 NCS1P62166 190 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TNFRSF17Q02223 184 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 BDH1Q02338 343 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 GPR50Q13585 617 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TPBGQ13641 420 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 RNPS1Q15287 305 aaKnown RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SPHARQ15513 63 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SYPL1Q16563 259 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ARHGAP11BQ3KRB8 267 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ARMC4Q5T2S8 1044 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 C18orf63Q68DL7 685 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 RPL13AP3Q6NVV1 102 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PLEKHG7Q6ZR37 379 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ZER1Q7Z7L7 766 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF100Q8IYN0 542 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OR2L13Q8N349 312 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF433Q8N7K0 673 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OR2M3Q8NG83 312 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OR4K5Q8NGD3 323 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OR4K14Q8NGD5 310 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 NDNFQ8TB73 568 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SETD6Q8TBK2 473 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ACOT11Q8WXI4 607 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OSTF1Q92882 214 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 RAB8BQ92930 207 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 GIMAP5Q96F15 307 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OTUB1Q96FW1 271 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 MS4A4EQ96PG1 132 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SLC38A2Q96QD8 506 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 STACQ99469 402 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 CCDC32Q9BV29 185 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ALG8Q9BVK2 526 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SLC38A1Q9H2H9 487 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 FN3KQ9H479 309 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PIGUQ9H490 435 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PLK3Q9H4B4 646 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 ARMC7Q9H6L4 198 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 CACYBPQ9HB71 228 aaKnown RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 DUSP22Q9NRW4 184 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 CA10Q9NS85 328 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 MAN2C1Q9NTJ4 1040 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 PLEK2Q9NYT0 353 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 IL20Q9NYY1 176 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 C1RLQ9NZP8 487 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 OPN4Q9UHM6 478 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 SLC13A4Q9UKG4 626 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 STUB1Q9UNE7 303 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 C19orf53Q9UNZ5 99 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 EXOSC1Q9Y3B2 195 aaKnown RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TET2Q6N021 2002 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-226ENST00000554350 IGHV3OR16-10A0A075B7F0 116 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 A0A087WUU8 490 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 IQCMA0A1B0GVH7 501 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 WASHC1A8K0Z3 465 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 B4DXG7 233 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF670-ZNF695F2Z2N8 137 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 J3QRK9 145 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 AP3D1O14617 1153 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 PGRMC2O15173 223 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 ENTPD6O75354 484 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 NDUFA7O95182 113 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 RAB36O95755 333 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 GPR75O95800 540 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 PTHP01270 115 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 IL1AP01583 271 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 ATP1B1P05026 303 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 YES1P07947 543 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 ADRA2AP08913 450 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 CT62P0C5K7 136 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 ACP2P11117 423 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 DBTP11182 482 aaKnown RBP4.77□□□□□ -1.65
ATXN3-226ENST00000554350 RPS4Y1P22090 263 aaKnown RBP4.77□□□□□ -1.65
ATXN3-226ENST00000554350 PTBP1P26599 531 aaKnown RBP eCLIP4.77□□□□□ -1.654e-18■■■■■ 40.6
ATXN3-226ENST00000554350 FGF9P31371 208 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-226ENST00000554350 MAP3K8P41279 467 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 RANBP1P43487 201 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 OMPP47874 163 aa4.77□□□□□ -1.65
ATXN3-226ENST00000554350 RORCP51449 518 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms