RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SLC7A13Q8TCU3 470 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRKCH-208ENST00000553846 RORBQ92753 470 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 SSX3Q99909 188 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 FN3KRPQ9HA64 309 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 ONECUT1Q9UBC0 465 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 CORO2BQ9UQ03 480 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 ADAM18Q9Y3Q7 739 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 TRAV27A0A087WT01 109 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 MEIOCA2RUB1 952 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PRSS37A4D1T9 235 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 AHCYL1O43865 530 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 ACSM4P0C7M7 580 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 SELLP14151 372 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 TNFRSF1BP20333 461 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PAX6P26367 422 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 TGM4P49221 684 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 CD83Q01151 205 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 POU4F2Q12837 409 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PIN1Q13526 163 aaPredicted RBP7.34□□□□□ -1.23
PRKCH-208ENST00000553846 OR8B8Q15620 311 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 LY6EQ16553 131 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PCK2Q16822 640 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 TCTEX1D4Q5JR98 221 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 WDR38Q5JTN6 314 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 CCDC80Q76M96 950 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 WDR86Q86TI4 376 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 FAM216BQ8N7L0 139 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 ST8SIA4Q92187 359 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 SPDL1Q96EA4 605 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 DCTN5Q9BTE1 182 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 POLR2J2Q9GZM3 115 aaKnown RBP7.34□□□□□ -1.23
PRKCH-208ENST00000553846 NPFFR1Q9GZQ6 430 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 HDHD2Q9H0R4 259 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 POLR2J3Q9H1A7 115 aaKnown RBP7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PNRC2Q9NPJ4 139 aaKnown RBP7.34□□□□□ -1.23
PRKCH-208ENST00000553846 THAP1Q9NVV9 213 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 RIMS3Q9UJD0 308 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 PRPF19Q9UMS4 504 aaKnown RBP7.34□□□□□ -1.23
PRKCH-208ENST00000553846 HERC2O95714 4834 aa7.34□□□□□ -1.23
PRKCH-208ENST00000553846 IGHV3OR15-7A0A075B7D8 119 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 VGLL3A8MV65 326 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 M0R1W7 72 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ACOT8O14734 319 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 PAHP00439 452 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 KITP10721 976 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 CD33P20138 364 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 CA6P23280 308 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 EEF1B2P24534 225 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 GUCA1AP43080 201 aaPredicted RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ATPAF1Q5TC12 328 aaPredicted RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 STUMQ69YW2 141 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 LIAT1Q6ZQX7 453 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 Q6ZS46 218 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 PATL1Q86TB9 770 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 BOLLQ8N9W6 283 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 OR13C2Q8NGS9 318 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 AENQ8WTP8 325 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ACOT11Q8WXI4 607 aaPredicted RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 BPIFA2Q96DR5 249 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 SEH1LQ96EE3 360 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 CLPTM1LQ96KA5 538 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 Q96M85 177 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ZNF583Q96ND8 569 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 DDOQ99489 341 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ADAT1Q9BUB4 502 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 HCAR1Q9BXC0 346 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 KAT8Q9H7Z6 458 aaKnown RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 RAB18Q9NP72 206 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 INPP5EQ9NRR6 644 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 C1orf123Q9NWV4 160 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 ADA2Q9NZK5 511 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 VSX1Q9NZR4 365 aaPredicted RBP7.33□□□□□ -1.24
PRKCH-208ENST00000553846 DNAJB11Q9UBS4 358 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 NDUFAF1Q9Y375 327 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 MED31Q9Y3C7 131 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 U3KQK5 164 aa7.33□□□□□ -1.24
PRKCH-208ENST00000553846 LCE6AA0A183 80 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 HTR3EA5X5Y0 456 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 CD300LBA8K4G0 201 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 DCTN6O00399 190 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 CDC42EP2O14613 210 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 GMDSO60547 372 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 MUC1P15941 1255 aaPredicted RBP7.32□□□□□ -1.24
PRKCH-208ENST00000553846 HOXD3P31249 432 aaPredicted RBP7.32□□□□□ -1.24
PRKCH-208ENST00000553846 BMXP51813 675 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 MTPNP58546 118 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 OR8G1Q15617 311 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 MEP1BQ16820 701 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 ANKDD1AQ495B1 522 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 DEFB121Q5J5C9 76 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 NCR3LG1Q68D85 454 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 EPGNQ6UW88 154 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 CFAP77Q6ZQR2 320 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 NAA40Q86UY6 237 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 GLB1L2Q8IW92 636 aa7.32□□□□□ -1.24
PRKCH-208ENST00000553846 CMTM4Q8IZR5 234 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms