RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RAB12Q6IQ22 244 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ACOT7LQ6ZUV0 252 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 PLXDC1Q8IUK5 500 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ASB13Q8WXK3 278 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 PTX4Q96A99 478 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 FOXRED1Q96CU9 486 aaPredicted RBP14.03□□□□□ -0.16
LDLR-204ENST00000545707 PHB2Q99623 299 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ZNF319Q9P2F9 582 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 LIPT2A6NK58 231 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 TMEM200CA6NKL6 621 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 OR6C76A6NM76 312 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 SULT2B1O00204 365 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 TOR1AO14656 332 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 SOCS1O15524 211 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 PIAS2O75928 621 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 IFNA6P05013 189 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 SLC25A4P12235 298 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 KLK2P20151 261 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 CNR1P21554 472 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 ZNF93P35789 620 aaPredicted RBP14.02□□□□□ -0.16
LDLR-204ENST00000545707 OR10R2Q8NGX6 335 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 SLC2A8Q9NY64 477 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 B3GAT1Q9P2W7 334 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.16
LDLR-204ENST00000545707 DUX1O43812 170 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 TSPAN9O75954 239 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 MPIG6BO95866 241 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 RAB3AP20336 220 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 APOBEC1P41238 236 aaKnown RBP14.02□□□□□ -0.17
LDLR-204ENST00000545707 EMP2P54851 167 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 NXPH1P58417 271 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 SRSF4Q08170 494 aaKnown RBP14.02□□□□□ -0.17
LDLR-204ENST00000545707 MYBPHQ13203 477 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 PHF19Q5T6S3 580 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 FAM69BQ5VUD6 431 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 DEGS2Q6QHC5 323 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 GLIPR1L1Q6UWM5 242 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 OR5D14Q8NGL3 314 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 ST8SIA1Q92185 356 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 WNT2BQ93097 391 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 FAM71F1Q96KD3 344 aaPredicted RBP14.02□□□□□ -0.17
LDLR-204ENST00000545707 KLRF1Q9NZS2 232 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 LHFPL6Q9Y693 200 aa14.02□□□□□ -0.17
LDLR-204ENST00000545707 PHF3Q92576 2039 aaKnown RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 VSTM2BA6NLU5 285 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ZNF814B7Z6K7 855 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 DNASE2O00115 360 aaPredicted RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 TIAF1O95411 115 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 IL2RAP01589 272 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ICAM2P13598 275 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 FOSL2P15408 326 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 OR3A4PP47883 348 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 NPY4RP50391 375 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 PPIAP62937 165 aaKnown RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 LPCAT3Q6P1A2 487 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 SLC25A45Q8N413 288 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 BHLHE23Q8NDY6 225 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 OR1S2Q8NGQ3 325 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 OR4K15Q8NH41 348 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 THAP6Q8TBB0 222 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 DDIT4LQ96D03 193 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 TMEM41AQ96HV5 264 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 GAREM1Q9H706 876 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ZNF107Q9UII5 783 aaPredicted RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 DMDP11532 3685 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ARID1AO14497 2285 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 RER1O15258 196 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 RAMP1O60894 148 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 BPNT1O95861 308 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 GP1BAP07359 652 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 PGAM2P15259 253 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 SERPINF1P36955 418 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 MC2RQ01718 297 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 SNTB1Q13884 538 aaKnown RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 ZNF345Q14585 488 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 MICBQ29980 383 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 PLAC9Q5JTB6 97 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 C5orf46Q6UWT4 87 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ABHD12BQ7Z5M8 362 aaPredicted RBP14.01□□□□□ -0.17
LDLR-204ENST00000545707 ARMC10Q8N2F6 343 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 PLPP5Q8NEB5 264 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
LDLR-204ENST00000545707 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
LDLR-204ENST00000545707 ARPC4-TTLL3A0A0A6YYG9 625 aa14□□□□□ -0.17
LDLR-204ENST00000545707 TRBV11-1A0A0K0K1C0 115 aa14□□□□□ -0.17
LDLR-204ENST00000545707 C5orf63A6NC05 138 aa14□□□□□ -0.17
LDLR-204ENST00000545707 ZNF20P17024 532 aa14□□□□□ -0.17
LDLR-204ENST00000545707 LAP3P28838 519 aa14□□□□□ -0.17
LDLR-204ENST00000545707 FAM122CQ6P4D5 195 aa14□□□□□ -0.17
LDLR-204ENST00000545707 ANKRD37Q7Z713 158 aa14□□□□□ -0.17
LDLR-204ENST00000545707 ZDHHC22Q8N966 263 aa14□□□□□ -0.17
LDLR-204ENST00000545707 INO80EQ8NBZ0 244 aaPredicted RBP14□□□□□ -0.17
LDLR-204ENST00000545707 ASF1BQ9NVP2 202 aa14□□□□□ -0.17
LDLR-204ENST00000545707 ASH2LQ9UBL3 628 aa14□□□□□ -0.17
LDLR-204ENST00000545707 GLS2Q9UI32 602 aa14□□□□□ -0.17
LDLR-204ENST00000545707 PCDHB10Q9UN67 800 aa14□□□□□ -0.17
LDLR-204ENST00000545707 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
LDLR-204ENST00000545707 MPTX1A8MV57 137 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms