RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SMURF1Q9HCE7 757 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 CRNNQ9UBG3 495 aaPredicted RBP24.18■■□□□ 1.46
CCM2-218ENST00000541586 DHDHQ9UQ10 334 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 SPTBN1Q01082 2364 aaKnown RBP24.18■■□□□ 1.46
CCM2-218ENST00000541586 M0R135 149 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 LYZL6O75951 148 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ANXA2P07355 339 aaKnown RBP24.18■■□□□ 1.46
CCM2-218ENST00000541586 RAB3BP20337 219 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 FAM57BQ71RH2 274 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 CXorf67Q86X51 503 aaPredicted RBP24.18■■□□□ 1.46
CCM2-218ENST00000541586 GABRG1Q8N1C3 465 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 OR8B12Q8NGG6 310 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 OR1K1Q8NGR3 316 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ZFAND2BQ8WV99 257 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ZNF799Q96GE5 643 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ZNF319Q9P2F9 582 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 PEX16Q9Y5Y5 336 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ARPC4-TTLL3A0A0A6YYG9 625 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 A0A0G2JK05 382 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 CTDSP2O14595 271 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 ANKRD16Q6P6B7 361 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 AP3S1Q92572 193 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 RNF121Q9H920 327 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 SLC17A5Q9NRA2 495 aa24.17■■□□□ 1.46
CCM2-218ENST00000541586 ANKRD61A6NGH8 418 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 CNOT4O95628 575 aaKnown RBP24.16■■□□□ 1.46
CCM2-218ENST00000541586 HLA-HP01893 362 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 IGHV1-2P23083 117 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 GRNP28799 593 aaKnown RBP24.16■■□□□ 1.46
CCM2-218ENST00000541586 HTR5AP47898 357 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 SLC6A9P48067 706 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 PABPC1L2AQ5JQF8 200 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 CEP78Q5JTW2 689 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 AKIP1Q9NQ31 210 aa24.16■■□□□ 1.46
CCM2-218ENST00000541586 ZNF503-AS2A6NEH8 195 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 APOC1P02654 83 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 S100A5P33763 92 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 KRTAP27-1Q3LI81 207 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 SFXN4Q6P4A7 337 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 OR13C3Q8NGS6 347 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 OR51E1Q8TCB6 317 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 BCL2L2Q92843 193 aaPredicted RBP24.15■■□□□ 1.46
CCM2-218ENST00000541586 LRRC46Q96FV0 321 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 TCF7L1Q9HCS4 588 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 CIB4A0PJX0 185 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 VGLL3A8MV65 326 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 BMP4P12644 408 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 SNTB1Q13884 538 aaKnown RBP24.15■■□□□ 1.46
CCM2-218ENST00000541586 HIKESHIQ53FT3 197 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 SFRP5Q5T4F7 317 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 PGAM5Q96HS1 289 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 ELOVL5Q9NYP7 299 aa24.15■■□□□ 1.46
CCM2-218ENST00000541586 AK6Q9Y3D8 172 aaKnown RBP24.15■■□□□ 1.46
CCM2-218ENST00000541586 USP9XQ93008 2570 aaPredicted RBP24.15■■□□□ 1.46
CCM2-218ENST00000541586 TRAV8-7A0A075B6U6 113 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 A0A1B0GTI1 187 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 CFL1P23528 166 aaKnown RBP24.14■■□□□ 1.45
CCM2-218ENST00000541586 TPTEP56180 551 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 STAC2Q6ZMT1 411 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 CPEB3Q8NE35 698 aaKnown RBP24.14■■□□□ 1.45
CCM2-218ENST00000541586 RNASE6Q93091 150 aaKnown RBP24.14■■□□□ 1.45
CCM2-218ENST00000541586 SLITRK2Q9H156 845 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 ADGRG4Q8IZF6 3080 aa24.14■■□□□ 1.45
CCM2-218ENST00000541586 CLEC18AA5D8T8 446 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 C5orf63A6NC05 138 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 RGS5O15539 181 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 SYT7O43581 403 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CD2P06729 351 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CD79AP11912 226 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 TFF3Q07654 80 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 P2RY6Q15077 328 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 IDNKQ5T6J7 187 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 DRAM2Q6UX65 266 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CLEC18BQ6UXF7 455 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CROCCP3Q8IVE0 287 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 MFSD4AQ8N468 514 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CLEC18CQ8NCF0 446 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 S100ZQ8WXG8 99 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 GFI1Q99684 422 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 NOX3Q9HBY0 568 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 HELZ2Q9BYK8 2649 aaKnown RBP24.13■■□□□ 1.45
CCM2-218ENST00000541586 NOTOA8MTQ0 251 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 CLDN25C9JDP6 229 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 PDCD5O14737 125 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 LMX1BO60663 402 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 RAD51DO75771 328 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 HGFACQ04756 655 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 ASPHD2Q6ICH7 369 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 LRRTM1Q86UE6 522 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 ZNF433Q8N7K0 673 aaPredicted RBP24.13■■□□□ 1.45
CCM2-218ENST00000541586 SLC30A2Q9BRI3 323 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 ZCCHC4Q9H5U6 513 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 HMG20AQ9NP66 347 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 DAPK2Q9UIK4 370 aa24.13■■□□□ 1.45
CCM2-218ENST00000541586 A0A1B0GVI7 797 aa24.12■■□□□ 1.45
CCM2-218ENST00000541586 TGFBR3Q03167 851 aa24.12■■□□□ 1.45
CCM2-218ENST00000541586 COMMD2Q86X83 199 aa24.12■■□□□ 1.45
CCM2-218ENST00000541586 GPR84Q9NQS5 396 aa24.12■■□□□ 1.45
CCM2-218ENST00000541586 ATPIF1Q9UII2 106 aa24.12■■□□□ 1.45
CCM2-218ENST00000541586 A1L4Q6 167 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms