RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR10S1Q8NGN2 331 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR4K15Q8NH41 348 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 FAM71F1Q96KD3 344 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 ST6GALNAC5Q9BVH7 336 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 C5orf66Q9H5L9 145 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 SEC61A2Q9H9S3 476 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 OBP2AQ9NY56 170 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 FAM186AA6NE01 2351 aa9.21□□□□□ -0.93
CDC42SE1-207ENST00000540998 MEX3AA1L020 520 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 LRP3O75074 770 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 DAOP14920 347 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 GLRA1P23415 457 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB32Q13637 225 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF528Q3MIS6 628 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 RPL7L1Q6DKI1 246 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC16A13Q7RTY0 426 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 DTX1Q86Y01 620 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 SVBPQ8N300 66 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 PRRT1Q99946 306 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 LAT2Q9GZY6 243 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM131Q92545 1883 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 SHANK1Q9Y566 2161 aa9.21□□□□□ -0.94
CDC42SE1-207ENST00000540998 SPTY2D1-AS1A0A0U1RR47 76 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 MS4A18H0YCH9 400 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SYT7O43581 403 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 KNG1P01042 644 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 RORAP35398 523 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 LPAR6P43657 344 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB13P51153 203 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 EMP2P54851 167 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 HSD17B7P56937 341 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 PDZK1IP1Q13113 114 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 MS4A18Q3C1V0 323 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR2A2Q6IF42 318 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 BAP18Q8IXM2 172 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 NAXEQ8NCW5 288 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 C20orf24Q9BUV8 137 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 KIR2DS5A0A0G2JLQ3 304 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 A0A0G2JNG1 304 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM150CB9EJG8 249 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 E9PLN8 166 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 KIR2DS3K7RE56 304 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SFTPBP07988 381 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SCAND1P57086 179 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 FBXW4P57775 412 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 KIR2DS5Q14953 304 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 CLEC18BQ6UXF7 455 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 ASB17Q8WXJ9 295 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SCPEP1Q9HB40 452 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC17A5Q9NRA2 495 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 PRAMEF26H0Y7S4 382 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 PHYHO14832 338 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 TO15178 435 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 IL2RAP01589 272 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 IGKV3-11P04433 115 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 MELTFP08582 738 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 HOXC4P09017 264 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 FAM157CP0CG43 387 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC26A5P58743 744 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 SUPT4H1P63272 117 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 HLA-DQA1Q5Y7H0 255 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 GLIPR1L1Q6UWM5 242 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 C1QL2Q7Z5L3 287 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 NAA40Q86UY6 237 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 LMX1AQ8TE12 382 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 C11orf40Q8WZ69 217 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 LIN37Q96GY3 246 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 UQCC1Q9NVA1 299 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 VSX1Q9NZR4 365 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF581Q9P0T4 197 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 ASPMQ8IZT6 3477 aa9.2□□□□□ -0.94
CDC42SE1-207ENST00000540998 METTL21EPA6NDL7 271 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 NPIPA5E9PKD4 350 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 AHSA1O95433 338 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 ADH6P28332 368 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CD80P33681 288 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 GABRA4P48169 554 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 BIDP55957 195 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 QRFPP83859 136 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 RIPPLY1Q0D2K3 151 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 LCN10Q6JVE6 187 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 PGAP1Q75T13 922 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR1M1Q8NGA1 313 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLAMF6Q96DU3 332 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 C5orf34Q96MH7 638 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CTSFQ9UBX1 484 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 NPIPA1Q9UND3 350 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 COL6A3P12111 3177 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 A0A1B0GW55 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 A0A1W2PPE3 182 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 NPIPB7O75200 414 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4L2P0CJ85 424 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms